Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1220 ATGAGTTTGAGTATGAGCTTGTGTGGTAGTTACAGTCTTCAAATTCGAAATCGCAGAATTGTAAGCTGCAATCTTCACCAGGATGGCAGGCATATTGTTCCCATCAATACGCACCAAAAAACTTCCAAACCTGAAAATTGTCTTCGGTCCAAATGGAAGATTAATGGCAATAACATTAGGACATGCATTGGAGTCATGACAGTGGCACACTTGGTTGCTCCAGTCACTGCAAAAGCTGAAGTGGCTGCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAATGACTGGTTTGGAGGCTTTCTATATTCAGCTGGACAACAGGCCAATGAAGCTGTTCAGGGCCAATTAACCTCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTGACCAGCCTTTCTCCCTGTACACTTAGTGTCTTACCACTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGCAAAAGCAGAGCAGAGGTTGTAGGAGATTCCATTGCATTCTCCTTAGGTCTTGCAACCACATTAGCACTGTTGGGTGTTGGAGCTTCATTTGCAGGAAAGGCTTATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCTATAATTATGGGTCTGAATCTTCTTGAGATCATTGAGTTACGGCTGCCCTCATTCTTTGACAGTTTTGATCCACGTGCAGCCGCTGCCAATTTCCCATCCAGTGTGCAAGCCTACCTGGCTGGGCTTACATTTGCTTTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCCACTCTTTTGGGATATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGCAGCTTACTTTTGACTTACACAACTGGCTATGTTTCTCCTTTACTCTTGGCTGCTTCTTTTGCTGGAGCATTACAGAGCTTGCTCTCATTTCGCAAGTTCTCAGCATGGATCAATCCTATAAGCGGAGCAATGCTGTTAGGTGGTGGTGTATATACTTTCTTAGATAGGCTGTTCCCAGTCACAATGGTGATGTAG 1035 0.4551 MSLSMSLCGSYSLQIRNRRIVSCNLHQDGRHIVPINTHQKTSKPENCLRSKWKINGNNIRTCIGVMTVAHLVAPVTAKAEVAASIYALADGSLNDWFGGFLYSAGQQANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1220 344 Pfam Cytochrome C biogenesis protein transmembrane region 128 334 IPR003834 GO:0016020|GO:0017004
Gso12g1220 344 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 59 344 - -
Gso12g1220 344 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 59 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1220 Gso-Chr12 21538161 21543061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1220 22 344 Chloroplast and Mitochondria Gene Families AT5G54290 71.513 4.51e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1220 - - gmx:100807029 663.299