Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1191 TGTAGATATCGAGCGTTTGATGAGTTAGAAGGGATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCGAACCTGTTGCGTAACTTCGATGATTTGGAGCGACTTTATTCAGAGGTTCATTTGCTCAAGACTTTGAAGCATAAAAATATAATTAAGTTTTACAATTCATGGGTTGACACCAAGAATGAGAACATCAACTTCATTACTGAAATTTTCACCTCAGGAACATTGCGTCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTGTGAAGAAATGGTCCAGGCAGATTTTGGAAGGCCTTTTATATCTTCACAGTCACAATCTGCTGGTTATTCATCGAGACCTTAAGTGTGATAACATTTTTGTTAATGGTAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGAAGCTATCCTTCAACAGGCCAATTCAGCTCACAGTGTCATAGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGTTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACCGTTGAGTACCCATATATTGAATGCACCAATGCTGCTCAAATATACAAGAAAGTGACATCTTTAAAAGAATGGCTTCACAACTTAGGAATAGTAGATCAAACAGTAATGGTACAAGATGACGAAGAACCTGATGATGGAGCTGTGCCTTCACCATGA 711 0.3952 CRYRAFDELEGIEVAWNQVKVANLLRNFDDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSRQILEGLLYLHSHNLLVIHRDLKCDNIFVNGNQGEVKIGDLGLEAILQQANSAHSVIGTPEFMAPELYEEEYNEFVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTSLKEWLHNLGIVDQTVMVQDDEEPDDGAVPSP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1191 236 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 3 207 - -
Gso12g1191 236 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1191 236 SUPERFAMILY Protein kinase-like (PK-like) 3 216 IPR011009 -
Gso12g1191 236 Gene3D Transferase(Phosphotransferase) domain 1 71 229 - -
Gso12g1191 236 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 207 - -
Gso12g1191 236 Pfam Protein kinase domain 4 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1191 236 Gene3D Phosphorylase Kinase; domain 1 2 69 - -
Gso12g1191 236 SMART serkin_6 3 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1191 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1191 Gso-Chr12 19667351 19671569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1191 3 207 MAP Kinase Kinase Kinase AT3G51630 68.293 7.85e-104 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso12g1191 Pkinase 7.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1191 K08867 - gmx:100805392 466.463