Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1172 ATGTCGGAAGAAACGACGTCGATTGACTACGTAATGGAGGCATCATCTAGGTCTCACTTCTCCGCCCTGAGACTCGACGGCCAGGTCCCATCCTCCGCCACGGCCGCGTCCTCCACTCTCGATTCAACCCTAACCCTCAATTCCCTTCCCAATCAACCCTTCGTCATAGGAGTTTCTGGAGGTACTGCCTCGGGCAAAACCACCGTCGGCAATATGATCATTCAGCAACTCCACGATCACTGCGTTGTCCTTGTAAATAAGGACTTGTTTTATCACGGGTTGAATCCTGAAGAGTTGAAACGTGTTCACAAGTACAATTTCAACCACCCTGGTGTTGATGTTATTCTTGATTGTATGGGAGCAACCTACTATCAAAAAAATCTTGATAGCTTGAATTTTGATGGAAGGCTTTTTATTATTGGCTTTCAAGGGAAGCATACATCAGCAGGAGACAAAGAGAAGATGGTGCCATTAGCAGAAGTCCAAGCACAAACAGATCAAACACAAGCAAAGGGGGTGCAGGGGGTGCAAACAACAACAAACAAGAGAAGAATGGTGAGGCCTGCTTACCTTATTGACTTCATTTGA 588 0.4626 MSEETTSIDYVMEASSRSHFSALRLDGQVPSSATAASSTLDSTLTLNSLPNQPFVIGVSGGTASGKTTVGNMIIQQLHDHCVVLVNKDLFYHGLNPEELKRVHKYNFNHPGVDVILDCMGATYYQKNLDSLNFDGRLFIIGFQGKHTSAGDKEKMVPLAEVQAQTDQTQAKGVQGVQTTTNKRRMVRPAYLIDFI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1172 195 Gene3D - 50 146 IPR027417 -
Gso12g1172 195 PRINTS Uridine kinase signature 53 70 - -
Gso12g1172 195 PRINTS Uridine kinase signature 83 94 - -
Gso12g1172 195 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 106 146 IPR036291 -
Gso12g1172 195 PANTHER URIDINE KINASE 31 119 - -
Gso12g1172 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 112 IPR027417 -
Gso12g1172 195 PANTHER URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC 31 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1172 Gso-Chr12 18136233 18138213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1172 1 110 PRT Gene Family AT3G27190 56.303 1.10e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1172 K00876 - gsj:114378840 377.096