Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1135 ATGGGGATTCAAAAATATATGGTTAACATAAAGGTTAGGTTTGCGGTTCTTTTGGTTCTTCTTCTTGTAGCAGCAGTCAGCCCTTCGGAAAAGAAGCAAACAGAAGATGATTTGGTTAGGGAGTTACTTGATCCAGCATCTGGATTGTTAGATGAGCATACGGAATTGTCCGGCAGCACCAATATAATCAGTTCTGAGAATCAACCAATATCACAGCCTGCACAGGAAGAAATACAAAAAATTATCAAGTCTTACTGTTCTCAATTCAAGGAGAACTTTCTTCACTGTTTGAGAAAAAATAATCGTCCATATCCTGTCTCAAGAAAAGAGGATGATTCCAAGATTTGGCATGTCACTTATATGGGACCACTTTTTTCCCGATCCAGTGATCCTGAAAGAAAATTTGGTCGTATTTTGCTCCAGCACATATCAGAACCGCCTAGTCCAGGCCCTGCAGTTGGATCACCTTCACCCAGTTTAACACCATCTCCTGAACCCAGTCTAGCACCATCATCTGAACCTAGTCTGGCCCCATCACCCTTTGCTCCAACGCCTCTAGTTCATAGACCTCTGCATAATTCTTTGCCACCAACATCATTTTTCCCAAAATTGACACCACCAGCAGCTTCAGAAATTTCTGCTCCTCCACCTTCTGACATTAACAAACAGGAAGAGAAGCATAGTAATAAAAAAACAGTTGTTCTCGCTGTAGTTATAACTGCATTAGTGACATTTATAGCTGCAGCAGTGCTCTTTTTATGCTGTACTCGGTATCGTAAGACTGGCCATGTTAGACTAAATGATGATAGACCTCTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATTCTTTTGGAAATTCAATGAAAGGGGAGAAAGTTGGGTTTCAGTCATCAAGTAATAGTTTAGTAGACAATAAGAAGTACTCAGTGCAGGAAAGTCAATCAATAGGAGCTCTTAATGCTGCTGCGGGATCACCATTTGAACTGAAACCTCCTCTCGGGAGGGTTCCCACCATCCCTTCTGGAATGCCTCCTTTAAAACCTCCTCCAGGCAGGCTAAACCCTCTTCCTCCTGAGCCACCTTCATTTAGGCCTTCTGGTGATGCTGCTCCAGCTGCTACTGCCGCTGTTGCTGCAGCTTCTCCTGCCCCTCAACAGCCTGCTATTAGTAGCACTCCACCACCACCCCGACCACCAGCTGGTGCCAAACCTGGCCCACCCCTACCACTACTGCCAGCACTAGCTGGTGCCAGACCTGGTCCTCCTCCACCACCTCCAGCCTCAGTTGGTGCCAAACCTGGTCCTCCACCACCACCCCCAGGACCAGCTGGTGCCAAACCTGGTCCACCTCCTCCACCACCCCCAGCTGGTGCCAAACCTGGTTCTCGTCCACCACCACCTCCTCCTATGAGTGGTGTGGCTCCTCCTCGACCTCCGCCCCCGTTTGGTTCAAAGGTGCAACGTCCCTTAGCTAGTGGATCAAAAGCTACAGTTGAAGCTGGAGTAGAAGGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCAGATCAATCAATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTTTAACGAAGAGATGATAGAGACGCTTTTTGGCTATAATGCCGTGGATAAGAACAATGGTCAAAAACAGAAACAGTCTTCCTCCCAAGATCCTTCACCACTGTTTATCCAGATCATTGACAAAAAGAAAGCACAAAATTTATTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGACATGAGCTTCCCCCGGAATTCCTTCAAACCTTGCTGAAGATGGCACCGACATCAGATGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATCTATCTCAACTTGGACCTGCTGACCGTTTCCTGAAAGCCATGGTTGACATTCCATTTGCATTTAAGCGAATGGAATTTCTGCTTTTCATGGGCTCACTTAAAGAGGAGCTTGCAACCATTATGGAGTCTTTTGCCATTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTCTGAAATTATCCGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACATTTTGTTGTTCTAGAGATTATCCGCTCCGAGGGCATAAAAGCCATCCGAAAGGCAAAAGAGAGCCAGAGCTCGTCTAGTATTAAATCAGATGGCCTTCCTGATAGTACCCAAGAAACAGAAGATCACTACCATGAAATTGGTCTTCAGGTGGTTTCACGCTTGAGCAGTGAACTTGAGAATGTGAAAAAAGCAGCAGTTATAGATGCTGACAGCTTAACAGGAACCACTGCCAAACTTGGCTATGGTCTCATAAAAACACGAGACTTGGTAACAAAAACCATGAAGAATGTGGAGGAAGATAGGGGCTTTTGTGAGACGGTGAAAAGTTTTGTGCAGAATGCTGAGGCTGATGTTACAAAGCTGCTGGAAGAGGAGAAGAAAATAATGACTTTGGTGAAGAGCACTGGTGATTATTTCCATGGGAATGCTGGGAAGGATGACGGCATAAGGTTGTTCATAGTAGTACGAGACTTCTTAATAATGGTGGATAAGGTATGCAAGGAGGTGAGAGATACACGGAAGAAGCTGGCAAAAACTCTAAAACAAGAGACTCCTAGAGGAGCATCTTCATCTGAAACACGTCCACCACCTGATTTTCATCAGCGGCTTTTTCCAGCAATTGCTGAAAGGAGGATGGATGACATTAGTTCAGACGACGAGAGTCCATAG 2922 0.4497 MGIQKYMVNIKVRFAVLLVLLLVAAVSPSEKKQTEDDLVRELLDPASGLLDEHTELSGSTNIISSENQPISQPAQEEIQKIIKSYCSQFKENFLHCLRKNNRPYPVSRKEDDSKIWHVTYMGPLFSRSSDPERKFGRILLQHISEPPSPGPAVGSPSPSLTPSPEPSLAPSSEPSLAPSPFAPTPLVHRPLHNSLPPTSFFPKLTPPAASEISAPPPSDINKQEEKHSNKKTVVLAVVITALVTFIAAAVLFLCCTRYRKTGHVRLNDDRPLLSLSMSDYSVGPSSYSFGNSMKGEKVGFQSSSNSLVDNKKYSVQESQSIGALNAAAGSPFELKPPLGRVPTIPSGMPPLKPPPGRLNPLPPEPPSFRPSGDAAPAATAAVAAASPAPQQPAISSTPPPPRPPAGAKPGPPLPLLPALAGARPGPPPPPPASVGAKPGPPPPPPGPAGAKPGPPPPPPPAGAKPGSRPPPPPPMSGVAPPRPPPPFGSKVQRPLASGSKATVEAGVEGEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQKQKQSSSQDPSPLFIQIIDKKKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKAMVDIPFAFKRMEFLLFMGSLKEELATIMESFAILEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAIRKAKESQSSSSIKSDGLPDSTQETEDHYHEIGLQVVSRLSSELENVKKAAVIDADSLTGTTAKLGYGLIKTRDLVTKTMKNVEEDRGFCETVKSFVQNAEADVTKLLEEEKKIMTLVKSTGDYFHGNAGKDDGIRLFIVVRDFLIMVDKVCKEVRDTRKKLAKTLKQETPRGASSSETRPPPDFHQRLFPAIAERRMDDISSDDESP* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1135 973 MobiDBLite consensus disorder prediction 149 183 - -
Gso12g1135 973 MobiDBLite consensus disorder prediction 342 370 - -
Gso12g1135 973 MobiDBLite consensus disorder prediction 206 227 - -
Gso12g1135 973 ProSiteProfiles Formin homology-2 (FH2) domain profile. 508 939 IPR015425 -
Gso12g1135 973 SUPERFAMILY Formin homology 2 domain (FH2 domain) 580 940 - -
Gso12g1135 973 PANTHER FORMIN-RELATED 1 971 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso12g1135 973 PANTHER FORMIN-LIKE PROTEIN 1 971 - -
Gso12g1135 973 Gene3D Formin, FH2 domain 513 945 IPR042201 -
Gso12g1135 973 MobiDBLite consensus disorder prediction 929 956 - -
Gso12g1135 973 MobiDBLite consensus disorder prediction 337 512 - -
Gso12g1135 973 MobiDBLite consensus disorder prediction 392 490 - -
Gso12g1135 973 MobiDBLite consensus disorder prediction 142 183 - -
Gso12g1135 973 Pfam Formin Homology 2 Domain 510 913 IPR015425 -
Gso12g1135 973 SMART it6_source 508 928 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1135 Gso-Chr12 16230120 16237706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1135 512 964 FH2 protein (formin) Gene Family AT5G54650 66.594 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1135 - - gmx:100793413 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1135 12 16230120 16237706 Gso6g2211 6 42714229 42721573 GST
Gso12g1820 12 41894993 41900156 Gso12g1135 12 16230120 16237706 PCT
Gso11g3043 11 46297342 46302530 Gso12g1135 12 16230120 16237706 PCT
Gso12g1135 12 16230120 16237706 Gso12g1820 12 41894993 41900156 PCT
Gso12g1135 12 16230120 16237706 Gso11g3043 11 46297342 46302530 PCT