Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1132 ATGGTCACCAAAAACCAGAACCGGCCTCCATTATCACTCACATCCACACCACCACCTCCTTCAAATTCAAAGAATTTTGAGGGTGATGTGCTCCTCCTAGACAATAAAGAGCAAAGAGTTGGAGCAGAAAAAATGGTGGGGACTCCAATTAATGGAAGAACAAGGCAAGCTTTCACAGTTGTCAATGGCGGTGTCCACGATCTTGGCCCCAGTAGTGCCCCTCCAAGCAATGCTGGATCGGACTATGGTGTCATAGAGTTCACAAGAGAGGATGTGGAAGCATTGCTAAGTGAGAAAGCCAAGAGAAAGGACAGATTTAATTATAAGGAACGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAAAAGTTAAAGAATTCACTGGAACTGACCCAGCAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATCTCGGAAATGAGAAGGAATTGCACTTCCTTACAAGAAAAATTGATAAAGGAAGAAACAGAAAAGTCGGCTGCAGCGGAATCTCTTGTTAAAGAGAGAGAAGCTAGGCTTGACATTGAGAGGTCACATAGTACTCTGTCAGAGGACCTTGGAAGAGCCCAACGAGAGATGCAAAGTGCAAATCAGAAGATAGCATCACTCAATGAAATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAGTACAATGGAAAACTTCATTCTGAGCTTTCGTCGGTTGAGGATGAACTTAAACGCGTAGAAAAAGAGAAGGCTACTATAGTGGAGAACATCACCATGTTAAGGGGTCAACTTACTATATCCGTTTCTTCTCAAGAGGAGGCTATAAAACAGAAGGATGTCCTGGCTACAGAAGTTTCCTCTCTTAGAGGAGAGTTGCTACAAGTAAGAGATGAGCGAGACCGGCAATTATCTCAAGTACAAACTTTAAGTTCTGAATTAGAGAAAGTTAAAGAATCTAAGAAACACTCCTCCACTGAATTGGACAGCTTGACCTTAAAAGCTAATGATCTGGAGGAAAAATGTTCTTTGAAAGATAATCAGATAAAGGCATTGGAAGAGCAACTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTAATATATCTGCATACGAGACAAGGACAGAGTACGAAGGACAACAAAAATTTGTTAATGAGTTACAAAGACGCTTAGCAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGAGGAAAAAATTACATAATACCATTTTGGAGTTAAAAGGGAACATTCGTGTATTCTGTCGAGTGAGGCCTTTATTAGCTGATGAAAGTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTCTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTACAAGGTTTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGAAGGCCTGGACATCCAGAGGAGAAGGGCTTGATACCTCGTTCATTAGAGCAAATATTTCAAACAAAGCAGTCTCAGCAACCTCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACGATCCGTGATCTGATATCTACAACAACACGCATGGAAAATGGTACTCCTGGAAAACAATATACAATCAAACATGACGCAAATGGAAATACACAAGTTTCTGATCTCACAGTAGTGGATGTTCATAGTGCTAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGTAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAACCTCATTGATCTAGCTGGTAGCGAGCGGCTTTCAAAGAGTGGATCAACCGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCACTGAGTGATGTTATATTCGCCTTAGCCAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTCCTTCAGCCTTGTCTAGGTGGAGACTCTAAGACACTAATGTTTGTGAACATTTCACCTGATCCTTCTTCAATTGGCGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTCGGCGTCAAACTAATGGACGTTCAATAGAGTCTCGCTTGAGCTATTTCTAA 2400 0.4037 MVTKNQNRPPLSLTSTPPPPSNSKNFEGDVLLLDNKEQRVGAEKMVGTPINGRTRQAFTVVNGGVHDLGPSSAPPSNAGSDYGVIEFTREDVEALLSEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIISEMRRNCTSLQEKLIKEETEKSAAAESLVKEREARLDIERSHSTLSEDLGRAQREMQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKATIVENITMLRGQLTISVSSQEEAIKQKDVLATEVSSLRGELLQVRDERDRQLSQVQTLSSELEKVKESKKHSSTELDSLTLKANDLEEKCSLKDNQIKALEEQLATAEKKLQVSNISAYETRTEYEGQQKFVNELQRRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLADESCSTEGKIFSYPTSMETSGRAIDLAQNGQKHSFTFDKVFTPEASQEEVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTTTRMENGTPGKQYTIKHDANGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSIGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1132 799 Coils Coil 165 192 - -
Gso12g1132 799 PRINTS Kinesin heavy chain signature 520 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 PRINTS Kinesin heavy chain signature 648 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 PRINTS Kinesin heavy chain signature 679 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 PRINTS Kinesin heavy chain signature 728 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 Coils Coil 326 395 - -
Gso12g1132 799 Pfam Kinesin motor domain 450 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 Coils Coil 410 430 - -
Gso12g1132 799 CDD KISc_C_terminal 442 780 - -
Gso12g1132 799 Gene3D Kinesin motor domain 387 780 IPR036961 -
Gso12g1132 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 776 IPR027417 -
Gso12g1132 799 ProSitePatterns Kinesin motor domain signature. 678 689 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso12g1132 799 Coils Coil 214 248 - -
Gso12g1132 799 MobiDBLite consensus disorder prediction 1 27 - -
Gso12g1132 799 PANTHER KINESIN-LIKE PROTEIN 41 798 - -
Gso12g1132 799 Coils Coil 256 283 - -
Gso12g1132 799 ProSiteProfiles Kinesin motor domain profile. 444 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g1132 799 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 798 - -
Gso12g1132 799 SMART kinesin_4 442 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1132 Gso-Chr12 16059679 16065934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1132 416 792 Calmodulin-binding Proteins AT5G65930 38.992 1.58e-78 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1132 K10405 - gmx:100784221 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1132 12 16059679 16065934 Gso6g2212 6 42769113 42775251 GST
Gso12g1818 12 41876678 41883166 Gso12g1132 12 16059679 16065934 PCT
Gso11g3045 11 46313685 46320007 Gso12g1132 12 16059679 16065934 PCT
Gso12g1132 12 16059679 16065934 Gso12g1818 12 41876678 41883166 PCT
Gso12g1132 12 16059679 16065934 Gso11g3045 11 46313685 46320007 PCT