Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1110 ATGATGAAGAATTTTGCCTACTACTTCAGTCAAAAACAACAACATCAACGTTTTTGTAGGTTTTTCCCACACAGCCTTGGATTCTTGGTTCGTTTTCTAGCCTTCCATGTCCACCCCTTCTTTATTCAACTTTGTTATTTTGTGATTCTTTCTCTGCTTGGTTACCTCGGTCTCAAGGCCTCCAAGCCAAGGACCCCCCTTAGACCAAATGACTTGGACCTCTTTTACACCTCAGTTTCTGCTTCCACAGTTTCTAGCATGGTAGCCGTTGAAATGGAGGTTGTCTCCAATTCTCAACTAATTCTCCTAACCCTTCTCATGTTTGTTGGTGGCGAAGTTTTCACTTCCATGCTCGACCTTGTATTTGCTAGGTATAAATTCACCCGGAGTGTCCAAAATAAAGTTAGCACCAATCATTCTTACCTGACTCGAACAAGATTACCTCCGGTAGATGATACTTCTGGTTTAGACCAAATTTTTTTTAGCAGCAATCCTTTTTTATCCACAAAGAAGCCCTCGATTAATGCCAATCAAATTGAACTTGGTTTAGTTTCTATTCATCATTCAGAATCAGAAAACCACAAACCAAGTGATAGTAATAATACTAACGTTCCAAAGGGCACGGTAGTGTCCTTTAACGACAGTGATAGACTTAAGTATAACTGTCTTAGTTACCTGACTTATTTAGTTTTAGGTTACCTTGTGGTGGTTCAATTTGTTGGCTTTAGTTCTGTGTCTTTGTACATAACCCTGGTACCGAGTGCAAGACAAGTACTGAAAAATAAAGGCATTAAGATTGCAACGTTTTCTTTGTTTACCATAGTTTCCACGTTTGCTAGTTGTGGTTTCATCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAACTCGGGGCTTCTTCTCCTTGTTCTCCCACACATCCTTCTAGGTAACACCCTTTACCCACCGTGTTTGAGGCTTGTGATAATGGTTCTGGAAAGGATTACTAAAAGAGAGGAATACTCGCACTTGCTTAAGAATTTCAAAGACGTGGGTTATGATCACATGCTTTCTGCTCTTCATTGTTGCCTCCTGGTTGCTACTGTGTTGGGTTTTAATCTTATACAGTTTGTGATGCTTTGCTCTATGGAGTGGAACACCAAAATCATGGAGGGTTTGAATGTGTATGAGAAAGTGGTGGCGTCCTTGTTTCAAGTTACAAACGCGAGACACGCCGGTGAATCTGTTTTTGATCTCTCCTCCATCTCTTCAGTCATATTGGTACTCTTCGTTGTCATGATGTACCTCCCACCATACACCACATTTTTACCAGTAAGAGAGCATGAAAATGATGCGAAGAGAAGCGAAAAAAGCGTGTTGGAGTGTCTTGTATTCTCTCAACTCTCTTACTTGGTCATTTTCATTATTCTGATTTGCATCACTGAGAGCAAAAGCTTAAGAGAGGACCCGCTCAACTTTAATGTGTTGAACATCACCCTAGAAGTCATCAGTGCTTATGGAAACGTAGGCTTCTCAACGGGATACAGCTGCGCTAGGCAATTGAAACCCGATGCGACGTGCAAAGATTCATGGGTTGGATTCTCCGGTAGGTGGAGTAGCAAAGGCAAGTTTATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAAAAATTCAACATGAAAGGTGGCAAAGCCTGGGACCTCTCCTAG 1689 0.4156 MMKNFAYYFSQKQQHQRFCRFFPHSLGFLVRFLAFHVHPFFIQLCYFVILSLLGYLGLKASKPRTPLRPNDLDLFYTSVSASTVSSMVAVEMEVVSNSQLILLTLLMFVGGEVFTSMLDLVFARYKFTRSVQNKVSTNHSYLTRTRLPPVDDTSGLDQIFFSSNPFLSTKKPSINANQIELGLVSIHHSESENHKPSDSNNTNVPKGTVVSFNDSDRLKYNCLSYLTYLVLGYLVVVQFVGFSSVSLYITLVPSARQVLKNKGIKIATFSLFTIVSTFASCGFIPTNENMMVFKKNSGLLLLVLPHILLGNTLYPPCLRLVIMVLERITKREEYSHLLKNFKDVGYDHMLSALHCCLLVATVLGFNLIQFVMLCSMEWNTKIMEGLNVYEKVVASLFQVTNARHAGESVFDLSSISSVILVLFVVMMYLPPYTTFLPVREHENDAKRSEKSVLECLVFSQLSYLVIFIILICITESKSLREDPLNFNVLNITLEVISAYGNVGFSTGYSCARQLKPDATCKDSWVGFSGRWSSKGKFILILVMFFGRLKKFNMKGGKAWDLS* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1110 562 Pfam Cation transport protein 456 516 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gso12g1110 562 Pfam Cation transport protein 218 429 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gso12g1110 562 PANTHER SODIUM TRANSPORTER HKT1 2 562 - -
Gso12g1110 562 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 2 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1110 Gso-Chr12 15301475 15306751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1110 59 561 Inorganic Solute Cotransporters AT4G10310 47.266 8.53e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1110 K24976 - gmx:100779582 1055.82