Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1106 ATGAACTCTGCCGCCGTCGCAATCAAATCCATCAAACTCGACCGCTCCCGGCCTAACTTAGACGATGCCCGTTGCGAGGCCAAAACCCCATCCCTCCTTTCCTACCCCAACATCCTCAAAGCACATTGTTCCTTCACAGTGGATCGCTGCCTCTGGGTGGTGATGTCGTTCATGGCCGCAGGATCACTTCAATCCATCATTTCTCATTCCCACCCCAACGGCTTAATGGAGCCCTACATCACCGTGGTTCTCAGAGACACGCTCAACGCGCTCTCCTACCTCCACTGCCAGCATCTCCATAGAGACATTAAAGCCGGTAACATCCTCATTTACACCAATGGGCAAGTGAAGCTTGCTGATTTCGGTGTCTCCGCTTCCATATACGAGTCCACCACCACCACCACCACGTCTTCTTCTTCGTCTCTGAAGTTCACTAATGTTGTCGGCACGCCCTATTGGATGGCTCCTGAGGTGATTCACTCACACACAGGTTACAGTTTCGAGGCTGATATATGGTCTTTTGGGATAACCGCGTTGGAGCTTGCGCATGGAAGGCCTCCTCTCTCGCACCTTCCACCTTCCAAGTTCATGATGCTCAAGATCACCAAGAGGGAAAATATGATAACACAATTAAAGAATGCACAGAGGCATTAG 654 0.5092 MNSAAVAIKSIKLDRSRPNLDDARCEAKTPSLLSYPNILKAHCSFTVDRCLWVVMSFMAAGSLQSIISHSHPNGLMEPYITVVLRDTLNALSYLHCQHLHRDIKAGNILIYTNGQVKLADFGVSASIYESTTTTTTSSSSSLKFTNVVGTPYWMAPEVIHSHTGYSFEADIWSFGITALELAHGRPPLSHLPPSKFMMLKITKRENMITQLKNAQRH* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1106 217 Gene3D Transferase(Phosphotransferase) domain 1 2 216 - -
Gso12g1106 217 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1106 217 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 207 - -
Gso12g1106 217 SUPERFAMILY Protein kinase-like (PK-like) 4 202 IPR011009 -
Gso12g1106 217 Pfam Protein kinase domain 4 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g1106 217 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 1 207 - -
Gso12g1106 217 SMART serkin_6 2 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1106 Gso-Chr12 15087499 15088785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1106 1 204 MAP Kinase Kinase Kinase Kinase AT4G14480 70.732 4.01e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso12g1106 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1106 K08835 - gsj:114379574 421.009