Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1079 ATGGCCAATTCCCTTAATAACCACCTGTTTGTTGTAGTATCTATTCTTTCTCTCTTAGCCTTTTCTAGCAACGCACAACTATCTCCCACCTTCTATGCCAAAACTTGCCCCAACCTTCAAACCATTGTGCGCAGTGCAATGAGGCAAGCTGTTGCTAAAGAAGCCAGGATTGGTGCCTCTATTCTTCGCTTGTTCTTTCATGATTGCTTTGTAAATGGCTGTGATGGATCAATCTTATTGGACGACACTGCCACCTTCACTGGCGAGAAAAATGCAGGACCTAACAGAAATTCAGCGAGGGGCTTCGAAGTTATTGATACCATTAAAACCAACGTTGAAGCTTCTTGCAATGCCACCGTTTCTTGTGCTGATATCCTAGCACTTGCCACAAGAGACGGAGTTGTGCTGCTAGGAGGACCCTCGTGGAGCGTCCCACTTGGAAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAGCCAAATCCCAGGACCATCCTCGGACCTCTCAACCCTAACATCAATGTTTGCAGCCAAAGGCCTAACCTCAAGTGACTTAACCGTGCTCTCTGGAGGCCACACAATAGGCCAAGCACAATGCCAGTTCTTCAGGAACCGCATATACAACGAAACCAACATAGACACCAACTTCGCCACCACCAGAAAAGCCAATTGCCCTGCCACCGGTGGGAACACCAACCTGGCCCCTCTCGACACCCTCACCCCCAACCGCTTCGACAACAATTACTTCTCCGACCTCGTTAACGGCCGCGGCCTTCTCCACTCCGACCAAGTTCTCTTCAATGGTGGGTCTCAGGATGCCCTTGTGAGGACCTACAGTGGCAACAATGCTGCATTCTTTAGGGACTTTGCTGCTGCCATGGTGAAGTTGGGCAACATTAGTCCCCTCACTGGGTCCAGTGGGGAGATCAGAAGGAATTGCAGGGTTGTGAATTGA 960 0.499 MANSLNNHLFVVVSILSLLAFSSNAQLSPTFYAKTCPNLQTIVRSAMRQAVAKEARIGASILRLFFHDCFVNGCDGSILLDDTATFTGEKNAGPNRNSARGFEVIDTIKTNVEASCNATVSCADILALATRDGVVLLGGPSWSVPLGRRDARTASQSAANSQIPGPSSDLSTLTSMFAAKGLTSSDLTVLSGGHTIGQAQCQFFRNRIYNETNIDTNFATTRKANCPATGGNTNLAPLDTLTPNRFDNNYFSDLVNGRGLLHSDQVLFNGGSQDALVRTYSGNNAAFFRDFAAAMVKLGNISPLTGSSGEIRRNCRVVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1079 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gso12g1079 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 Gene3D - 30 316 - -
Gso12g1079 319 PANTHER PEROXIDASE 72-RELATED 19 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 Gene3D Peroxidase, domain 2 164 298 - -
Gso12g1079 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gso12g1079 319 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso12g1079 319 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
Gso12g1079 319 PANTHER PEROXIDASE 19 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1079 Gso-Chr12 14426953 14430472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1079 25 315 Peroxidase AT5G05340 66.894 1.79e-142 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1079 K00430 - gmx:100810392 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1079 12 14426953 14430472 Gso12g1079 12 14426953 14430472 ECH