Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1066 ATGTGGAACAACTCAGTTTTTGAGGTGGACAGGAGGGTGAAAGGCAGAAATTTCTTAATTCTTGTAGGGAGATGGACTAACGATAATCTGAGGCTGTTCATTGTCAATGTATATGCTCCATGTGATCTTGCTGGGAAGAGAGCTATGTGGGAAGAGTTGAGGCAGTTAAGAGCTTCTAACCCTGAGGTCTTCTCGTTTTTTCTACTTTGTTTGTTTATAACTGTGGATGAAGTTGGTAGTAGCTCTGAGTGGAGCACAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCCTGAGGATGCTTCAGACCGATGGGAGAAGATTGTGGTTGATATACCGGGGAAAACCTTGGAAGAGATTAAACACCACTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCTCCAGAGGGCTCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGAGGCCACTCTTGGAATAGTAACAATGAATCTAATCATGGAACTAAGGCTTCAAGATCAGATAAGGAACGGCGAAAGGGTATTGCATGGACAGAGGATGAACACAGGTACAACTTTAGACAAGATAGCTCCCAATCCTGA 636 0.4292 MWNNSVFEVDRRVKGRNFLILVGRWTNDNLRLFIVNVYAPCDLAGKRAMWEELRQLRASNPEVFSFFLLCLFITVDEVGSSSEWSTEQDKAFENALAIHPEDASDRWEKIVVDIPGKTLEEIKHHYELLVEDVNQIESGCVPLPSYNSSPEGSTSHASDEGAGKKGGHSWNSNNESNHGTKASRSDKERRKGIAWTEDEHRYNFRQDSSQS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1066 211 PANTHER TRANSCRIPTION FACTOR KUA1 79 202 - -
Gso12g1066 211 Pfam Myb-like DNA-binding domain 82 126 IPR001005 -
Gso12g1066 211 Gene3D - 76 143 - -
Gso12g1066 211 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
Gso12g1066 211 CDD SANT 83 130 IPR001005 -
Gso12g1066 211 ProSiteProfiles Myb-like domain profile. 82 130 IPR001005 -
Gso12g1066 211 MobiDBLite consensus disorder prediction 180 205 - -
Gso12g1066 211 PANTHER TRANSCRIPTION FACTOR DIVARICATA 79 202 - -
Gso12g1066 211 SMART sant 80 132 IPR001005 -
Gso12g1066 211 MobiDBLite consensus disorder prediction 141 211 - -
Gso12g1066 211 MobiDBLite consensus disorder prediction 141 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1066 Gso-Chr12 14146419 14149982 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso12g1066 Myb_DNA-binding 7.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1066 - - gsj:114378790 439.499