Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1063 ATGCGTCCACCGCGGAAGAGGGTGGATTTCTCGCGCGGCGACAAGGTGGAGATCTGCAGCAACGAGGAGGGCTTCCTCGGCTCCTACTACCCGGCCACGGTCGTGTCGCGCCTCGACAACGGCCTCTACGTCGTACGCTACGACACGCTCCTCGAGGACGACGCCTCGTTCCAGCCCCTCACCGAAACCCTATTTCCGAAAGAGCTCCGTCCCCATCCGCCACGTGTCCCCAGGACCCACTTCGCGCTCCACCAGTGCGTCGACGCCTTCGACAACGACGGCTGGTGGCTCGGCCAGATCACCGGCAAGAAGGACGGCGAGCATTACTATGTTTACTTTTCCACCACCAATGAGGAGATTGCGTATCATGTTTCTGGAATTAGGGTTCACCACGAGTGGAGCCATGGCGAGTGGGTTTTGTCCAATTGA 429 0.5991 MRPPRKRVDFSRGDKVEICSNEEGFLGSYYPATVVSRLDNGLYVVRYDTLLEDDASFQPLTETLFPKELRPHPPRVPRTHFALHQCVDAFDNDGWWLGQITGKKDGEHYYVYFSTTNEEIAYHVSGIRVHHEWSHGEWVLSN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1063 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Gso12g1063 142 SMART agenet_At_2 8 77 IPR014002 -
Gso12g1063 142 SMART agenet_At_2 79 135 IPR014002 -
Gso12g1063 142 Pfam Agenet domain 13 74 IPR008395 -
Gso12g1063 142 PANTHER - 7 140 - -
Gso12g1063 142 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1063 Gso-Chr12 13962483 13963497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1063 20 136 PHD Transcription Factor Family AT5G58610 31.884 5.69e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1063 - - gmx:106794115 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1063 12 13962483 13963497 Gso12g1063 12 13962483 13963497 ECH