Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1055 ATGGGTGTTCGTCTTCTTGGTATCAGAAAGGCATCATTTGCTGCAAACCAAGCATCTTCAAAAGTTGTGGATATCCCAAAGGGTTACCTTGCAGTCTATGTTAGAGAGAAAATTACCAACAAAATGAAGCGGTTTGTTATCCCCATTTCATACTTGAACCAACCTTCCTTTCAAGTTTTGTTGAATCAAGTTGAGGAAGAATTTGGGTATGACCATCCAATGTGTAGCCTCACAATACCATGCAAGGAGAATGAGTTCCTAAATGTCACTTCTAACTTGAAATTAATGGTTGAGGAAGAGTTTGGATATGACCATCCCATGGGTGGCCTCACAATTCCTTGGAGTGAAGATGTCTTCCTAGGTATAACTTCTCGCTTGAATTGA 384 0.401 MGVRLLGIRKASFAANQASSKVVDIPKGYLAVYVREKITNKMKRFVIPISYLNQPSFQVLLNQVEEEFGYDHPMCSLTIPCKENEFLNVTSNLKLMVEEEFGYDHPMGGLTIPWSEDVFLGITSRLN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1055 127 PANTHER AUXIN-INDUCED PROTEIN X10A 97 127 - -
Gso12g1055 127 PANTHER AUXIN-INDUCED PROTEIN X10A 1 94 - -
Gso12g1055 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 94 IPR003676 GO:0009733
Gso12g1055 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 97 127 IPR003676 GO:0009733
Gso12g1055 127 Pfam Auxin responsive protein 12 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1055 Gso-Chr12 13885468 13892872 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1055 4 86 Calmodulin-binding Proteins AT3G43120 40.698 1.51e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1055 K14488 - gmx:112998539 258.84