Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1052 ATGGGTTTTCGTCTTCCTGGTTTCAGAAAGGCGTCCTTTTCTTCAAACCAAGCATCTTCTAAAGTTGAGGATGTCCCAAAGGGTTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAAACAACCTTCCTTTCAAGATTTGTTGAATCAAGCTGAAGAAGAATTTGGGTATGACCATCCAATGGGTGGTCTCACAATACCATGCAAGGAGGATGAGTTCTTAAGTATCACCTCTAACTTGAATGACTTATAA 279 0.405 MGFRLPGFRKASFSSNQASSKVEDVPKGYLAVYVGEKMKRFVIPMSYLKQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLSITSNLNDL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1052 92 PANTHER AUXIN-INDUCED PROTEIN X10A 1 91 - -
Gso12g1052 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Gso12g1052 92 MobiDBLite consensus disorder prediction 1 22 - -
Gso12g1052 92 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1052 Gso-Chr12 13847542 13848066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1052 14 82 Calmodulin-binding Proteins AT3G43120 50.725 1.48e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1052 K14488 - gmx:112998546 189.504