Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1045 ATGGGTTTTCGCTTACCTGGTATCAGAAAGTCATTATTTGCAGCAAATCAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGCTATCTTGCAGTCTATGTTGGAGATAAAATGAAGCGGTTTGTGATTCCTGTTTCATACTTGAACCAACCTTTATTCCAGGACTTGTTGAGTGAAGCTGAGGAAGAGTTTGGCTATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATACCTTCCAACATATAACTTCTTTCTTGAACAGACCATAA 279 0.4158 MGFRLPGIRKSLFAANQASSKAVDAPKGYLAVYVGDKMKRFVIPVSYLNQPLFQDLLSEAEEEFGYDHPMGGLTIPCSEDTFQHITSFLNRP* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1045 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Gso12g1045 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Gso12g1045 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1045 Gso-Chr12 13755087 13755628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1045 24 92 Calmodulin-binding Proteins AT3G43120 52.857 3.50e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1045 K14488 - gmx:112998536 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1045 12 13755087 13755628 Gso6g2308 6 44399358 44399935 GST