Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1042 ATGGGTTTTCGTTTACCTGGAATCCGGAAGACATCATTTTCTGCAAACAAATTGGCATCTCCAAAAGTCATGGATGTGCCGAAGGGCTACGTTGCAGTCTATGTTGGAGAGAAAATGAGGCGGTTTGTGATTCCTGTATCATACTTGAACCAACCTTCATTCCAGGACTTGTTAAGTCAAGCTGAGGAAGATTTTGGATATCATCATCCAATGGGCGGCCTCTCAATTCCATGCAGTGAAGATGTATTCCAGCATATAACTTCTTGCTTGAATTGA 276 0.4239 MGFRLPGIRKTSFSANKLASPKVMDVPKGYVAVYVGEKMRRFVIPVSYLNQPSFQDLLSQAEEDFGYHHPMGGLSIPCSEDVFQHITSCLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1042 91 Pfam Auxin responsive protein 13 90 IPR003676 GO:0009733
Gso12g1042 91 PANTHER AUXIN-INDUCED PROTEIN 6B 1 91 - -
Gso12g1042 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1042 Gso-Chr12 13721299 13722127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1042 25 91 Calmodulin-binding Proteins AT3G43120 47.761 6.28e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1042 - K14488 gmx:100793927 190.274