Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1040 ATGGGTTTTCGCTTACCTGGTATCAGAAAGTCATTATTTGCAGCAAATCAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGCTATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCTGTTTCATACTTGAACCAACCTTTATTCCAGGACTTGTTGAGTGAAGCTGAGGAAGAGTTTGGCTATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATACCTTCCAACATATAACTTCTTTCTTGAACTGA 273 0.4212 MGFRLPGIRKSLFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPVSYLNQPLFQDLLSEAEEEFGYDHPMGGLTIPCSEDTFQHITSFLN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1040 90 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Gso12g1040 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Gso12g1040 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1040 Gso-Chr12 13701169 13701898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1040 24 85 Calmodulin-binding Proteins AT3G43120 56.452 3.35e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1040 K14488 - gmx:100793401 185.267