Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1009 ATGAGGACCGGTGTAGGAGATATTGTTCAAGTAGAAGGAGGGCACATTGTTAGGTCCACAGGTAGAAAAGATCGCCACAGCAAGGTCTACACTTCGAAAGGGCCACGCGATCGCCGCGTTAGACTCTCAGCACACACAGCCATTGAGTTCTATGATGTTCAAGACAGGCTTGGCTATGACAGGCCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCAAAGACTTCCATTGACAGGCTTGCTGAGCTTCCTCCATGGCATCCACCTACTCATGAGGAAGAAAAGCAGAATGATGCTGCAGGATCAAGTGGAATCATAGCCATTGCGCAACAACAACAACAACATGAACAGCAATCAGAGTCTTGTGGTTACAACTTTCAGCTCCAAAGGCAATTGGGGGCCTTCAGTTCAACCCATGCTGACACTGACCCCATCAATTTTCAAACCAACAACTCCTCAGAAGATCTTGGCCTATCCCTCCATTGCTTCCAAGACCACCCTGGCCTCATTCATTGGCAATCACAACAGACAGGTGCACATCAAACACCTCCTTCAAATGAACACCAAATCCGAACCCTTTTTGCTGGCTCAACCCCAGGTGGCTTTGAGAACCATTATCAAAGAAGTGTGACTTGGAACAATGAAGCAACTACCACTGATCATGTGAACAGGTTGGGGTTCATACTCAACTCACAGCCATTTATAGGCCAAGGTTCTGCTTCAGCTTATGCTCAAAGTGGGGGGACCCTTCAGTCCAGTTTTTCATTTCCAATGACTTCTCCCTCTGAGCTTCACAGGCCCCAGCCAGTGAATCAACCTTCCATCTTTGACAGCAGGTTTGTGTCTGATGGATTAGCTGATTTCTGCATTCCAGATAGAATTCAAGGTGTGGAAGAGAACCATGGAGTTGCTTCCAATAGGCCATCTTCTTCCCCTAGTTCTATCCACTGA 951 0.4763 MRTGVGDIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKTSIDRLAELPPWHPPTHEEEKQNDAAGSSGIIAIAQQQQQHEQQSESCGYNFQLQRQLGAFSSTHADTDPINFQTNNSSEDLGLSLHCFQDHPGLIHWQSQQTGAHQTPPSNEHQIRTLFAGSTPGGFENHYQRSVTWNNEATTTDHVNRLGFILNSQPFIGQGSASAYAQSGGTLQSSFSFPMTSPSELHRPQPVNQPSIFDSRFVSDGLADFCIPDRIQGVEENHGVASNRPSSSPSSIH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1009 316 PANTHER TRANSCRIPTION FACTOR TCP4 3 313 - -
Gso12g1009 316 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Gso12g1009 316 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 313 IPR005333 GO:0003700
Gso12g1009 316 Pfam TCP family transcription factor 21 119 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1009 Gso-Chr12 12938315 12941483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1009 4 88 TCP Transcription Factor Family AT3G15030 88.235 2.71e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso12g1009 TCP 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1009 - - gmx:100782826 518.85