Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1003 ATGGACTCGCATTGCCTCTTACGTTTCCGCTTCGCATGTTTTGTTCTCTTCGCTTCCGTCGCATGTTGCTTTTCACACCCTTCTCTCCTCGGTATACACCCTCTAGATGAGAAATATTACAACTCTGAGGTGATCAAGTGCAGGGATGGATCAAAATCCTTCTCCAGAGACCGTCTCAATGACAATTTCTGTGATTGTCCTGATGGCACTGATGAGCCTGGAACTTCAGCTTGCCCCAACGGAAAATTTTATTGCAGAAACCTAGGTAGCAAGCCGCAGTTTATAGTTTCTTCTCATGTTAATGATCATTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAATCATTTGTTGCCCAAACACATGTGTCATGGGTGGGAATGCTGAGTCCACGTTTAGCAATTGCAAGTCAGAAGCAAGTCAAAATGGAGTGAAGTCAGAGGAATCAGTTCATACTGGTTTGAAGTTGGTGATTATTCTACAAGTGGTTCTGGTTATTTTTCTGGTATTTCTCTGGAGTTTTCGTTGCCGCACCAGATCTAGAAGGAGACATTACCGTTGA 567 0.4303 MDSHCLLRFRFACFVLFASVACCFSHPSLLGIHPLDEKYYNSEVIKCRDGSKSFSRDRLNDNFCDCPDGTDEPGTSACPNGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGIICCPNTCVMGGNAESTFSNCKSEASQNGVKSEESVHTGLKLVIILQVVLVIFLVFLWSFRCRTRSRRRHYR* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1003 188 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 8 187 IPR039794 -
Gso12g1003 188 Pfam Glucosidase II beta subunit-like 18 151 IPR028146 -
Gso12g1003 188 PANTHER EXPRESSED PROTEIN 8 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1003 Gso-Chr12 12787202 12791518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1003 29 146 Calmodulin-binding Proteins AT5G56360 60.504 5.38e-45 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1003 12 12787202 12791518 Gso12g1003 12 12787202 12791518 ECH