Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0962 ATGACTGGCAGAGAAATCCTCCATATGATGAAGGTGAAAGCAGGGTTTGGAACACCAGACACAGGGAATGGAAAAGGCAAAATATCAAAACACATTACACATGGCTTTCACTTGATGAAGGGCAAATCAGCGCATCCTATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAGAGAATTAGGCTTGTTTGCAATATTTGATGGCCACTTAGGCCATGATGTAGCAAGCTATTTGCAGAACCACCTTTTCCAAAACATCTTGCAACAGCATGACTTTTGGACTGAGACAGAAAGCGCAGTGAAAAAAGCATACGTTGAAACAGATGAGAAAATATTGGAACAAGAACTTGTGTTGGGGCGAGGAGGGTCAACAGCTGTGACTGCAATACTTATTGATGGTCAGAAGCTTGTAGTAGCAAATGTTGGTGACTCAAGAGCTATTATCTGTGAGAATGGAAAGGCAAGACAACTATCAGTGGATCATGAACCAAGCAAGGAAAAAAAATCGATTGAGAGGCGTGGGGGTTTTGTATCAAACATTCCAGGAGATGTCCCTCGAGTAGATGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGACAGGAGCCTGAAGATGCATCTTAGTTCAGAACCTGATGTGATTGTACAGGAAGTAGATCAACATACAGAGTTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACGAAGAAGCAGTGGAATCTATTAGACAAATAAAGGATGCTCAAGCTGCAGCAAAGCAATTGATTGAAGAGGCAGTTTGCAAGAAAAGTAAGGATGACATATCTTGCATAGTTGTGAGGTTCCAATGA 846 0.4137 MTGREILHMMKVKAGFGTPDTGNGKGKISKHITHGFHLMKGKSAHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFQNILQQHDFWTETESAVKKAYVETDEKILEQELVLGRGGSTAVTAILIDGQKLVVANVGDSRAIICENGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVIVQEVDQHTEFLILASDGIWKVMSNEEAVESIRQIKDAQAAAKQLIEEAVCKKSKDDISCIVVRFQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0962 281 Gene3D - 28 281 IPR036457 -
Gso12g0962 281 CDD PP2Cc 34 280 IPR001932 -
Gso12g0962 281 Pfam Protein phosphatase 2C 44 273 IPR001932 -
Gso12g0962 281 SMART PP2C_SIG_2 38 280 IPR001932 -
Gso12g0962 281 Coils Coil 243 270 - -
Gso12g0962 281 SUPERFAMILY PP2C-like 30 280 IPR036457 -
Gso12g0962 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Gso12g0962 281 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Gso12g0962 281 SMART PP2C_4 22 278 IPR001932 -
Gso12g0962 281 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0962 Gso-Chr12 11625978 11628957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0962 22 281 PP2C-type Phosphatase Gene Family AT4G28400 73.462 2.34e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0962 K17506 - gmx:100819846 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0962 12 11625978 11628957 Gso12g0962 12 11625978 11628957 ECH