Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0951 ATGGCATTCCATAGGTTTCTGGGGCTCTTGATTTTGATGACTCCGATCATGTTTGTTCAAGTTGTGGCAAGGCAATTCGATGTTGGTGGCAAAGATGGGTGGGTGCTGAAGCCTACTGAAGACTACGATCACTGGGCTCAAAGAAACAGATTTCAAGTCAATGACACTCTCCATTTCAAGTACAATAAAGGGAGTGATTCGGTTGTGGTGGTGAAGAAGGAGGACTTCGATTCATGCAACATCAACAACCCCATACAAAAGATGGACGGTGGTGATTCAACTTTCCAACTTTCCAACTCTGGCCTTTTTTACTTCATAAGTGGCAACCTTGGCAACTGCAAAAACGGTCAAAAGCTCATTGTTCTTGTCATGGCTGCGAGGCAACCAATTCCTAGGGCTGCGCCGCCACCACAGAAGATTCCGGCAACCAGTTTGACTTCTCTGGCACCGACGCCGACGGACAATTCGGGTTCAGGGAGGGTTGGTGTGAGTGTGGGGATTGTTTTGATGTTCACTGGCTTTGTTGGGTTGGTTTAG 537 0.4749 MAFHRFLGLLILMTPIMFVQVVARQFDVGGKDGWVLKPTEDYDHWAQRNRFQVNDTLHFKYNKGSDSVVVVKKEDFDSCNINNPIQKMDGGDSTFQLSNSGLFYFISGNLGNCKNGQKLIVLVMAARQPIPRAAPPPQKIPATSLTSLAPTPTDNSGSGRVGVSVGIVLMFTGFVGLV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0951 178 MobiDBLite consensus disorder prediction 140 157 - -
Gso12g0951 178 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Gso12g0951 178 PANTHER BLUE COPPER PROTEIN 16 140 IPR039391 GO:0009055
Gso12g0951 178 MobiDBLite consensus disorder prediction 133 157 - -
Gso12g0951 178 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Gso12g0951 178 CDD OsENODL1_like 24 124 IPR041846 -
Gso12g0951 178 PANTHER EARLY NODULIN-LIKE PROTEIN 2 16 140 - -
Gso12g0951 178 Gene3D - 22 128 IPR008972 -
Gso12g0951 178 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0951 Gso-Chr12 11471155 11473020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0951 1 152 Phytocyanin Superfamily AT4G28365 46.753 1.47e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0951 - - gmx:100778867 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0951 12 11471155 11473020 Gso6g2389 6 45478383 45479821 GST
Gso11g3121 11 47113375 47114784 Gso12g0951 12 11471155 11473020 PCT
Gso12g0951 12 11471155 11473020 Gso11g3121 11 47113375 47114784 PCT