Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0934 ATGGCGTCTGGATCCTCGGGTCGCGGCAACTCTGCCTCGAAAGGCTTCGATTTCGCTTCCGATGACATCCTCTGCTCCTACGACGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACACCGATCCGCAGGATTTTCACAAATCAAGGAGGATGTTTCCCACTACTGCCTATAATCCACCTGAAGATTCTTTGAGCCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTGATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAATTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAAATGCGATATAAATCGTGACCATGTGGAGCAAGAGTCAAGGCTGAAATCTCTTGAAAAACATGTTCAAGAAGTTCACAGGTCTGTACAAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCAGCCATTCACAGTCCAATGAGGAGAGGTCTTCACCTACCACAGATCCTAAAAAAACTGACAATGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCTCTGCCTCATCAAATAGCCCCTCAGCCGCAGCCTCCAGCACCCCAGGTTCAGGCTCAGGCTCAGGCTCCCGCACCAAATGTGACTCAAGTCCCTCAACAGCCTCCTTATTACATGCCACCCACCCCTCTGCCAAATCCAGCTGTGCCCCAGCACCCACAGAATCAGTATTTACCATCCGATCAACAATATCGAACACCCCAACACGTGGCTCCACAACCAACACCATCTCAAGTAACCCCATCTCCTGTGCAACAATTTTCTCACTATCAGCAGCAACAGCAACAGCCACAACAACAGCAACCGCAGCAGCAACAACAATGGTCACAGCAGGTGCTGCCTTCACAGCCACCTCCAATGCAATCTCAAGTAAGACCTCCCTCTCCAAATGTGTACCCTCCATACCAGCCAAATCAAGCAACAAACCCATCACCTGCAGAAACACTGCCAAACAGCATGGCCATGCAAATGCCATACTCGGGAGTTCCACCACCAGGATCTAGCCGCACCGATGCCATACCTTATGGATATGGAGGAGCTGGCAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGAGCTCTTTTCCTGCACCCCCAGCTGACATGTATGGACCTTCCGGGAACCTCCCGGCGCTTCCTCCACCTAGTGGTGCATACATGATGTATGATGGTGAGGGAGGAAGAACACATCATCCACCCCAACCTCATTTTGCTCAACCTGGATATCCCCCAACAAGTGCTTCCCTTCAGAACCCTCCACCAGGTCTTAATCTCATGGTCCGAAATCCGAACCAGTCGCAATTCATCCGCAACCATCCCTACAATGAGTTGATTGAGAAACTGGTGAGCATGGGATTCAGGGGGGATCATGTTGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAACTCGGTACTTGACAGGTTGAATGTGCATAGCTCGGTGGGTCCTCAGAGAGGAGGATGGTCAGGGTGA 1605 0.4953 MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDPQDFHKSRRMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKCDINRDHVEQESRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQIAPQPQPPAPQVQAQAQAPAPNVTQVPQQPPYYMPPTPLPNPAVPQHPQNQYLPSDQQYRTPQHVAPQPTPSQVTPSPVQQFSHYQQQQQQPQQQQPQQQQQWSQQVLPSQPPPMQSQVRPPSPNVYPPYQPNQATNPSPAETLPNSMAMQMPYSGVPPPGSSRTDAIPYGYGGAGRTVPQQPPPQQMKSSFPAPPADMYGPSGNLPALPPPSGAYMMYDGEGGRTHHPPQPHFAQPGYPPTSASLQNPPPGLNLMVRNPNQSQFIRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGGWSG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0934 534 MobiDBLite consensus disorder prediction 232 255 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 30 62 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 256 276 - -
Gso12g0934 534 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
Gso12g0934 534 Coils Coil 128 164 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 322 343 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 432 452 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 283 321 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 344 358 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 209 374 - -
Gso12g0934 534 MobiDBLite consensus disorder prediction 161 194 - -
Gso12g0934 534 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 532 - -
Gso12g0934 534 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0934 Gso-Chr12 11071562 11077902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0934 478 519 Trihelix Transcription Factor Family AT3G01560 40.476 7.23e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0934 - - gmx:100810231 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0934 12 11071562 11077902 Gso12g0934 12 11071562 11077902 ECH