Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0909 ATGCAGCAGGAAAAATGTATACACCTGGTTCACATTCAAGCTTTTAAACACTTGAGTCTCAAGTGTACTATTAATGACATAAGTGCTAAAGGTCAACCGGAACCTTCTGGATGGTTAATTAGTGGTGTACAGGATCTTGGATTAGACCATTTTCATCTTGGGGTTTTGTGCTTCATAGGGAACTGCATGTGTATGGCTACTTTTCTATCCATTCAGGGGATGGGAATTCCTGTTGGTAAATTGGCCTTGTACACAACACTAGGAGGAGTTCGACCATCAGCATTTGAAGATTTTGCAAACCATAATGCTTTTGAATTGCTTGCAAAATATGGCACAACTCATCTTGTTCAGGGGACCGCATCTGTCGTTCTTGCTAGGGTCGTGGCAGCCTTGAAGCTCATTAACGGTAATCTGGCTGACCATACATTCTTGTTCCTTGGGGCTGGAGAGGCTAGAACTGGAATAGCAGAACTAATAGCTCTTGAGATGTCAAAGCAGACAAAGACACCTATAGAGGAGACTCGCAAGAACATATGGCTTGTAGACTCAAAGGTAGTAGAAAAAAATCATGATGGGTTGTCCATTCAGGCCAACAATGCATACATCTTCCTTGCATTTGGTCTTGGGTTGGTAATCTCAGCAACAATCAGAGTGCATGACGATATGCTTCTAGCAGCTTGCTTGGCTACACGTCTCCCTCGCCCTCAGAATCTTGTGAAGTATGCTGAGAGCTACATGTATACCCCTGTCTACCCAAACTATAGGTGA 768 0.4336 MQQEKCIHLVHIQAFKHLSLKCTINDISAKGQPEPSGWLISGVQDLGLDHFHLGVLCFIGNCMCMATFLSIQGMGIPVGKLALYTTLGGVRPSAFEDFANHNAFELLAKYGTTHLVQGTASVVLARVVAALKLINGNLADHTFLFLGAGEARTGIAELIALEMSKQTKTPIEETRKNIWLVDSKVVEKNHDGLSIQANNAYIFLAFGLGLVISATIRVHDDMLLAACLATRLPRPQNLVKYAESYMYTPVYPNYR* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0909 255 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 184 IPR036291 -
Gso12g0909 255 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 71 112 IPR046346 -
Gso12g0909 255 SMART Malic_M_2 116 243 IPR012302 GO:0051287
Gso12g0909 255 PANTHER MALIC ENZYME-RELATED 69 94 - -
Gso12g0909 255 PANTHER MALIC ENZYME-RELATED 95 185 - -
Gso12g0909 255 PANTHER MALIC ENZYME-RELATED 194 227 - -
Gso12g0909 255 PANTHER MALIC ENZYME-RELATED 228 255 - -
Gso12g0909 255 Gene3D - 116 189 - -
Gso12g0909 255 PANTHER MALIC ENZYME 69 94 - -
Gso12g0909 255 PANTHER MALIC ENZYME 95 185 - -
Gso12g0909 255 PANTHER MALIC ENZYME 194 227 - -
Gso12g0909 255 PANTHER MALIC ENZYME 228 255 - -
Gso12g0909 255 Pfam Malic enzyme, NAD binding domain 116 184 IPR012302 GO:0051287
Gso12g0909 255 Pfam Malic enzyme, NAD binding domain 193 227 IPR012302 GO:0051287
Gso12g0909 255 Gene3D - 190 250 - -
Gso12g0909 255 Gene3D - 37 94 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0909 Gso-Chr12 10549504 10557943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0909 19 72 Nodulin-like Gene Family AT5G45370 55.556 1.82e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0909 K00029 - gsj:114380430 510.375