Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0899 ATGGGTTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAAGAGCAATGGAGACATGGTCTCTCCATCTTGCTTAGAAACTGGATGCTGTGGGCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAACAGAATTTTCACCAATGGAAAGAGCCGCAGTTCATGCATATTTACACAGCAGGGCCGCAAGGGTATTAATCAGGATGCAATGATTGTGTGGGAGGATTTCATGTCTGAAGATACTATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTAGTTGCGCGCAAAGTGAGGGATGCCTTGCCAATTAAGCTAATTTCATCTTTGCATTCTAATGAATCGAAGCGAAATGGGTCAGGTAAAACTTGCTTCAAAGGGAATGTAAAACCTGATAGTGGAGACTCTGAGAAGGATTGCTCTGCGGAGGATAAACTGAACTCGACATGGAGGGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCGAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCGAATCTGTTCATGGGCTATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGATAGCAATGACTCCATTGTGGCTATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAGAGAATTAAGAAGTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCCATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCAGCTTACGGACAGAGATCAGTTCATTATTCTTGCCTCAGATGGGGTATGGGATGTTTTAAGCAACGAGGAGGTGGTTGAGATAGTATCATCAGCGCCAACGCGATCATCAGCGGCAAGAATTCTGGTAGATTCTGCTGCTAGGGAGTGGAAACTCAAATACCCTACATCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGAGGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCGGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACAAATGGAGCACTATCTGTTGATGTTGTTGAAGATGCAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTAGTCCAACTTCCTAGATTTTCCGAAGAAGGGCCAAACTCTTGA 1416 0.4449 MGCCVSTSSRSTCSSKSNGDMVSPSCLETGCCGQKRTRRTFSDHVISLHHLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKVRDALPIKLISSLHSNESKRNGSGKTCFKGNVKPDSGDSEKDCSAEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSIVAIQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIILASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALSVDVVEDATSSADDQNWSGLEGVTRVNSLVQLPRFSEEGPNS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0899 471 MobiDBLite consensus disorder prediction 380 411 - -
Gso12g0899 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Gso12g0899 471 MobiDBLite consensus disorder prediction 381 411 - -
Gso12g0899 471 CDD PP2Cc 65 370 IPR001932 -
Gso12g0899 471 Pfam Protein phosphatase 2C 94 347 IPR001932 -
Gso12g0899 471 SMART PP2C_4 50 368 IPR001932 -
Gso12g0899 471 MobiDBLite consensus disorder prediction 1 21 - -
Gso12g0899 471 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Gso12g0899 471 Gene3D - 57 372 IPR036457 -
Gso12g0899 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Gso12g0899 471 MobiDBLite consensus disorder prediction 128 157 - -
Gso12g0899 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0899 Gso-Chr12 10276400 10280180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0899 1 471 PP2C-type Phosphatase Gene Family AT1G03590 69.811 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0899 - - gmx:100798340 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0899 12 10276400 10280180 Gso12g0899 12 10276400 10280180 ECH
Gso12g0899 12 10276400 10280180 Gso6g2431 6 45980563 45983963 GST
Gso12g1716 12 40745890 40751024 Gso12g0899 12 10276400 10280180 PCT
Gso11g3149 11 47366227 47368897 Gso12g0899 12 10276400 10280180 PCT
Gso12g0899 12 10276400 10280180 Gso12g1716 12 40745890 40751024 PCT
Gso12g0899 12 10276400 10280180 Gso11g3149 11 47366227 47368897 PCT