Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0885 ATGGCGAACGGGTTAGAGAGAGAAAGTGGGTTGACGTTGTTCAGCGAGGAGGAGCTGAGGGAGGTGAGTGGGGTGAAGCGTGTTGGGGACTATGTCGAAGTCACGTGCGGGTGCACGAGTCATAGATACGGTGACGCTGTGGGGAGACTTAGGGTTTTCGTTAATGGGTACCTTGAGATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACTGCCAGGAAATGGAAGAATAATGTCTGGGTAATTGTTAATGGTGAGAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAATCAGGTGTCAAAAGCTGCAAATGGCTCCCATAGATCCCATAATGGTCGGGCTTGTCACCGTGATGAGTTTGTTCGCTGCACTAGTTGCAATAAAGAGCGTAGGTTTCGTCTGAGGACTAAAGAGGAATGCCGCATTCACCATGATGCTTTGGCAGATGCAAATTGGAAATGTTCTGATCTTCCATATGACAAAATTACATGTGATGATGAAGAAGAAAGAGCAAGCCGTAGAGTTTACAGGGGATGCACTCGTTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGCTGTGATATCTGCCGCTTTTCAGATTGCAGCTGCCAGACTTGTGCTGACTTTACAAACAATGCCAAAGCTTGA 711 0.4669 MANGLERESGLTLFSEEELREVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSHNGRACHRDEFVRCTSCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDKITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0885 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 IPR020533 -
Gso12g0885 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Gso12g0885 236 PANTHER PROTEIN ULTRAPETALA 1 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0885 Gso-Chr12 9943771 9948196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Gso12g0885 SAND 0.0001 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0885 - - gmx:100796203 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0885 12 9943771 9948196 Gso12g0885 12 9943771 9948196 ECH
Gso12g0885 12 9943771 9948196 Gso6g2439 6 46078841 46083432 GST