Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0871 ATGTTAGGACACAAGTACTGCATACTGGGCAGGTTGTCATCTGAAGTTGGATGGAACTTATTTGATATCATCAGGGAGCTAGAAAAGAAGAGAAAGGACAAGGCACAATTGGTTTATGAGAGAAAGAAGCATCTCAACAATTTAAGGGTGAAAGCCGAGAAGGTTGCTGAAGACAAGCTCGGTTCCCAACTTGATATCCTTGCTCCAGATACTGAGCAGTCTTAG 225 0.4267 MLGHKYCILGRLSSEVGWNLFDIIRELEKKRKDKAQLVYERKKHLNNLRVKAEKVAEDKLGSQLDILAPDTEQS* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0871 74 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 3 69 - -
Gso12g0871 74 Gene3D - 22 69 - -
Gso12g0871 74 PANTHER RIBOSOMAL PROTEIN L13 3 69 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0871 Gso-Chr12 9724710 9725640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0871 3 69 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 79.104 2.87e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0871 K02872 - gmx:106795359 124.02