Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0841 ATGGAATTGACAAGACGCAGCTATGCGGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAGGGGGGGAAGGAAGAGGAAATTTCTATAGATGGTGGAGGAGCTTTCTCATCATCCATTTATGTTCATGGAATTAAGGTTGAAAATGAGTTGAAACATTGCAGGAAAGAATTGATAGAGAGGAACAATGATGTCAAAACTAGTACTTCTCCTCCTGCTCCAGTTTCAGAAAAGGGTAGCTCTAGATATTTATTGACAAAGCATTCTGGATCAACCTTGGGTGTGGAAAGTGGTCATGGCAGAAATTTGATTGCTGATTCACCACATAATGCACCAAGCCCTTCTGCTACTGCTGAATCACCAAGTCATGGTCCAACACCAACAAGTTCTCCATCATCACCATCTCAATCATCACCAACTCCAAGTCCAAAAGGTGTGGATTTACCACTCCCTCCAAATATGTTTGTGCCATTTCCACCATCACCCCGTGTACCTCATCCTCCTCCTCAAAATTTTCGACCTATAGTATATGCTCCTGTTCCTTCACCACCTAACAATGAAAACAAAAAGAAGCAAACAATTATTTTAGCCGCCGCTTTATCAGGAATTATAATCTTGATAGGCTTGGCCCTCTGCTATCGTGAAGCAAGTCGCAACAAAGGTGACAGAGATGACAGGCCTTTGCTCGTATTAACCTCAAGTGATTATTCTGGTGGATCAAAGAAGGTTGTTCGATTGGGAGATGCTGACAAGGAAGAATCTGACATTGGCAATGGAAAGAAGCCTTCTAATTTTAGAAATTGGTCCATTAAGGGTGGACATAACAATGGCTCACTGGTTGAGACAACAGCATCAGAAGGTGTAGGACAAGTTCCAGTGCCTCCTAATGGAAAGCCTGCCCCTCCACCTCCACCTCCCAGACCACCACCACCACCGGCTCCAAAGCCGCCACCGCCTCCTGCTCCTCGTGCACCGCCACCTCCAAAAGGTGCTCATCCTCCACCTGCTCCTCCTAAACCAATGGGAGGTAAAAATCAAGGTCCACTACTTGCTAAAGAAGGAACTTCAAGTGATGGTGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCTGACCAATCAATGGTGTGGCATGAGATCAGAGCAGGATCATTCGTGATCAATGAGGAAATGATGGAGTCTTTGTTTGGCTGCACCAACCAGAATAAAAATGAACCTAAAAAAAATTCACCACATGTTGATACTTCAGTGCATTATATTCAGATTATTGACCCTAAGAAAGCACAGAACTTATCAATTCTCTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTATTGATGCTCTTAAAGAAGGTAATGAGATTCCTGTGGAGCTCATTCAGACGTTGTTGAAGATGGCACCTACAACAGATGAGGAATTGAAGCTAAGGCTATTCACAGGACAACTCTCAGAACTAGGCCCGGCAGAGAGGTTTCTCAAATTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTCTCATGTTCATGTTTATGCTTAAAGAAGACTTCTCAAGCATTAAGGACTCCTTTGCCACATTAGAGGTTGCATGCCACGAACTCAGAAAAAGCAGGCTATTCCTCAAACTACTCGAAGCAGTTCTCAAAACCGGCAACCGCATGAACGACGGAACCTACCGTGGAGGCGCACAGGCATTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTAAAAGGAACAGACAGCAAGACAACACTCCTGCACTTCGTCGTCCAAGAAATCATCCGCTCCGAGGGAATAAGAGCCGTGCGAACAGAAAGAGCGAGCAGAAGCATCTCTAGCGTCGGAACCAATAACGATTCCGACGAAGGAACAGAGGAGTCCGAGGAGCATTACCGCAGCCTCGGACTCCAGGTGGTCTCCGGGCTCGGAGACGTGAAAAAGGCCGCGCTTATAGACGGGGATGCGCTAAGCAGCTCCGTCTCTAAGCTTGGCTACTCCATGGTGAAGACTCAAGAATTCTTGGACAGGGACATGAAGAGCATTGAGGAAGAGAGTGAGTTCCAGCATTGCATGGAGAGTTTCATGGTGAGAGCGAGGGAGGAAGTGACGTGGCTGGTGGATGAAGAGAAGAGGATAATGGCTTTGGTTAAGAGCACTGCGGACTACTTTCACGGGAACGCGGGGAAGGACGAAGGGCTACGTTTGTTCTTGATCGTGCGTGATTTCTTGACCATATTGGACAAGGTTTGCAGAGAGGTGAGCGAGTCCACCGTGAACTTAGCCAAGGCTGCAAGCAATAGCGCCAAAGAAGGGACTAGGAGTTCGGTTTCTTCTTCCCAAAACTCCACAACTCCGCCTGTTGATCTTCATAGAAGGCTGTTTCCAGCAATTGCGGAGAGGAGAGTAGATTACTCTAGCTCTGACGAGGATGAAGAATTTTAA 2490 0.4647 MELTRRSYAVVYVILLCALAQGGSEGKGGKEEEISIDGGGAFSSSIYVHGIKVENELKHCRKELIERNNDVKTSTSPPAPVSEKGSSRYLLTKHSGSTLGVESGHGRNLIADSPHNAPSPSATAESPSHGPTPTSSPSSPSQSSPTPSPKGVDLPLPPNMFVPFPPSPRVPHPPPQNFRPIVYAPVPSPPNNENKKKQTIILAAALSGIIILIGLALCYREASRNKGDRDDRPLLVLTSSDYSGGSKKVVRLGDADKEESDIGNGKKPSNFRNWSIKGGHNNGSLVETTASEGVGQVPVPPNGKPAPPPPPPRPPPPPAPKPPPPPAPRAPPPPKGAHPPPAPPKPMGGKNQGPLLAKEGTSSDGDAPKPKLKPFFWDKVNAKPDQSMVWHEIRAGSFVINEEMMESLFGCTNQNKNEPKKNSPHVDTSVHYIQIIDPKKAQNLSILLRALNVTTEEVIDALKEGNEIPVELIQTLLKMAPTTDEELKLRLFTGQLSELGPAERFLKLLVDIPFAFKRLESLMFMFMLKEDFSSIKDSFATLEVACHELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDSKTTLLHFVVQEIIRSEGIRAVRTERASRSISSVGTNNDSDEGTEESEEHYRSLGLQVVSGLGDVKKAALIDGDALSSSVSKLGYSMVKTQEFLDRDMKSIEEESEFQHCMESFMVRAREEVTWLVDEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLTILDKVCREVSESTVNLAKAASNSAKEGTRSSVSSSQNSTTPPVDLHRRLFPAIAERRVDYSSSDEDEEF* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0841 829 MobiDBLite consensus disorder prediction 70 102 - -
Gso12g0841 829 Pfam Formin Homology 2 Domain 366 762 IPR015425 -
Gso12g0841 829 ProSiteProfiles Formin homology-2 (FH2) domain profile. 362 788 IPR015425 -
Gso12g0841 829 MobiDBLite consensus disorder prediction 114 137 - -
Gso12g0841 829 Gene3D Formin, FH2 domain 368 799 IPR042201 -
Gso12g0841 829 PRINTS Proline rich extensin signature 112 124 - -
Gso12g0841 829 PRINTS Proline rich extensin signature 133 149 - -
Gso12g0841 829 PRINTS Proline rich extensin signature 156 168 - -
Gso12g0841 829 PRINTS Proline rich extensin signature 169 190 - -
Gso12g0841 829 PRINTS Proline rich extensin signature 305 330 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 138 176 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 225 370 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 68 176 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 266 291 - -
Gso12g0841 829 PANTHER FORMIN-RELATED 1 827 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso12g0841 829 MobiDBLite consensus disorder prediction 626 645 - -
Gso12g0841 829 SUPERFAMILY Formin homology 2 domain (FH2 domain) 432 774 - -
Gso12g0841 829 SMART it6_source 362 777 IPR015425 -
Gso12g0841 829 MobiDBLite consensus disorder prediction 780 803 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 250 265 - -
Gso12g0841 829 PANTHER FORMIN-LIKE PROTEIN 1 827 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 300 348 - -
Gso12g0841 829 MobiDBLite consensus disorder prediction 780 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0841 Gso-Chr12 9162585 9168099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0841 364 792 FH2 protein (formin) Gene Family AT5G67470 46.606 2.70e-118 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0841 - - gmx:100816477 935.25