Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0839 ATGGGAGATGGAGGCGTGGCATGTATGCCTCTGCAGCAGCAGCATGTTATTGAGAGGTTGCCGAATGCGGCGGCGGAGAAGGCGCTCTGCGGAGGCAAGAGTGGGAACGGGTTCGATTCTGGGTTGCTCAAGGTAGCTGGCAAGAGGAAGAAGAAGGTAAAGGTGAAGAAGAAAGTGTCGCCTGCGGCAAAGAAGGTGGTGAAGAGTGAATTGACAGTGGACGGAGTGGGCAGCAGGGGTGGGAATGATGTTGAGAGTGGGGAAGTGTGCGGGGAGATGGATGAAGTGGAAGAGGGTGAGCTGGGGACCTTGGGGTGTGAGCTGGAGAATGGAGAGTTTGTACCAGAGAAGCCGGTGATGCTGATGCGGAGAAGTGAAATTGAGAATGGGGAGATTGTCAGTGAGAGATGGAAGAAAGGGGAGGTGGAAAGGGGGGAGTTTGTTTCAGGAAAATGGAGAAAGGAGGAGGATGTGGAGAAAGGGGAGATAGTTCCTGAGAAGGGTAGGAAAGGAGAAACTGAGAAATGGGAATATGGGTCGTGGAGAGGTGGAATGAAGGATGATATTGAGAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACATGGGGAGGGATGATTATGGCTATGCTAGAATCCGCAGGTACCAGCCAGGTAGGGATAAAGGCTGGAAAAATGAACGGGAGCATACACCACCTTCTGGGAGATATTATACAGGTGATGAGCATTTTAGAAAGAAGGAATTGAATAGAAGTGGAAGTCAGCATGCTAAAAGTGCTCCCAGGTGGGAGAGTGGACAAGAGAGAAATATAAGGATCAGTTCAAAGATTGTGGACGAGGAGAAAAATGAACACAGTAATAGTAGGACCCATATGCGGGATTACTCTTCTGGAAATCGGTTGAAAAGGCATGGTAATGAATCAGAAGGCTGTGAGCGGAAGAACTATGGAGATTATGCCGGCTCAAAAAGTCGGAGGCTTTCTGATGATAGTCCCCGCCTTGCTTATTCTGAGCACTATTCTCGCCTCTCCGTGGAAAGATCTTATAGAAATAGTTCTTCTAAATCATCAGCAGACAAGTATTCTTCCAGGCATCATGAGTCTTTGCCTACCAGATCAGTTTATGACAAGCATGGACGAAGCCCTGGTAATTCTGAGCGATCCCCACATGACCGAGCCAGGTATTATGATCATAAAGATCGCACTCCAGTGCGTCCTTCACCCTACAGTTGTGACAGATCTCCATATAGCAGTGAGAAATCCCCACATGGTCGGGAGAGATCCCCATATAATAGGAATTGGGATAGAAGTCGTCACCATGATCATAAAATGAGAAGTCCTACTCATGCTGAGCGGTCCCCACAAGATCGAGGTCGACATCATGATCGGAGGGACCCCACTCCAAATTTAATAGAGCAATCCCCACATGATCGAACTAGGTCAAACATGCATCGAGAAATAAATAGTAAAATCTCATCAAGTGAAAAACATAACTCACAACATAGTTGTAAGGATTATGAAGATAAGCATGTCCAAAAGGAGGCAAATCTTTCTGATGTAGAATCTCAAGGTGAAAGAAATGTGCATAATGCCAGTAAGTCTTTTGAGATAGATGTCTGCAGTGAACCTGAAAAGGAACAACAATCCTCTAATCCAACTGTAAGCTGCAAAGGCTCTCCTTGCTTGGAGCCATTACCCGAGGAGCTAGCTTCTATGGAAGAAGATATGGACATATGTGACACTCCTCCACATGTCCCTGTGGTGGTGGATTCGTCATCTGGCAAATGGTTTTACCTTGATTATAACGGTGTAGAACATGGGCCTTCTAAGTTATCTGACATCAAGGTCCTTGTTGATGATGGTGTACTTATGTCAGATCACTTTATTAAGCACATAGATAGTGACAGGTGGCTAACTGTTGAAAATGCAGTATCCCCTGTGACAGCTCAGAGTTTTCTATCAGTTGTGTCAGAAACCATAACCCAGTTGGTAAACCCTCCAGAAGCCCCTGGTAATCTTTTGGCTGATACTGGAGATATTCTTCAATCTGGTCCTGAGAATTATCTGGGAATCCCGACGCCTATTCTGCAGCCAATGTTATGCTCTGAAGACAGTGGGATTGCATCTGTATTGTTGGAGGACCTCCACATTGATGAAAGGGTTGGAGTTCTGTTAGAGGGTTATGATGTCATTCCAGGAAGGGAATTTGAGGCAATAAAAGAATCTTTGCAAATGAATTTTGAATATGCAAAATGGGAGGGATTGGAGGAGTGTGAAGGTTTTCCTGGCCATGATACTTGCCTGAGGATGGAACATGATTCAAGAATTGATTCATCTAGAGAATATGAGTCTCAAGTAAGTATACCCTCTGGCAAGGAAAATGGATTTACCCTTGGTGTTCCTGGTGACTGGTTTTCTGCTCAATGGTCATGCAAAGGTGGTGATTGGAAGAGGAACGATGATGCCCAAGATAGATATTGTAATAAAAAACTTGTCCTTAATGATGGGTTTTCACTATGTCAAATGCCTAAATCTGGATGTGAAGATCCTCGTTGGACTCGAAAAGATGACTTGTATTATCCTTCTCATAGCAGGAGGCTTGATCTTCCTGTTTGGGCTTTTTGTACTGATGAGAGGGGTGATTGCAGTACTTTGAGCAAACCTGTTCAAACCAAGCTTGCTTCTGTTAGAGGAGTGAAAGGAAATATTCTTTCAGTGGTAAGGATAAATGCATGTGTAGTTAAGGACCAGGGATCATTGGTCTCTGAGTCATGCCACAAGACCCGAAGCAAGGATAGGTATCCTTCAAGGTCAACTTGGTCTTTCTCTTCAACCAGTTATAGCAAGAGATCCTCAACTGAAGAAGATTCTCAGTCAAAAGCTTCTAATGATCAAGGTTCTCTAGGCTCTTGCAGGAGCATGGAATTTATTAATATTCCTAAAGACTATTGTCGTACTGTCCATGACTTACAATTACATTCAGGCAACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGAGCTACAGCGTTTAGTAGACCAAGGAATTGTAAAAAAGTATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCCGTTACCTCTTCTGCTGAAACATATGATTTCGATGTTAGTCTACGAAGTCATCAAGAAAGTAGTACATTGTCTGGTGAATGTTCTGGACTACCATCAAAGCAAATTCATGGTGCTTCTGTTGGTGAGCATGACTCAAAGTCAAATTTGTTTAACAGCTTACAGCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAATTAGTAATGAGATCATATAAGAGCCGAGAATTCGCCGCTGTTATAAATGAGGTTTTAGATCCCTGGATTAATACAAGACAGCCAAAGAAAGAAACTGAGAAACAAACATATTGGAAATCTGAAGGCGATGGACATGCTTCCAAAAGAGCTAGGATGCTGGTTGATTATAGTGAAGAAGATAGTGATTTTGAAGATGGCAGCCTGCCAAATTGGAAAGATGAATCCACTTTTGAGGCTTTATGTGGTGATGCTACATTCTCTGGGGAAGGAAGTGACATTACTGATCCCAATGTTGGAAGCTGGGGTTTATTAGATGGTTGTATGTTGTCACGAGTTTTCCACTGTTTAAGGTCTGATTTGAAATCACTTGCCTTTGCATCAATGACTTGCAAGCATTGGAGAGCTACTGTAAGGTTTTACAAAAAGGTCTCAAGGCATGTTAATTTGTCATCCTTGGGTCATTCTTGCACTGATTCCATAATGTGGAACATTTTGAATGCCTATGAAAAAGACAAGATAGAATCTATTGTTCTAATTGGTTGCACCAATATTACTGCTGGCATGCTTGAGAAAATTCTTCTTTTGTTTCCTGGTTTATCTACAGTAGACATTAGAGGGTGCAGCCAGTTTGGAGAGCTGACTCTGAAATTTACCAATGTGAAATGGATCAAGAGCCATAGTTCACATATAACCAAAATTGCATCAGAGTCACATAAAATCAGAAGTGTTAAACAATTTGCTGAGCAAACTTCATCTGTTTCTAAGGTCAGCATTTTGGGTATTAGGGATGATTTTGGTGAGCTGAAGGACTATTTTGATAGTGTGGATAAGAGAGACACAGCGAAGCAATTATTCCGTCAAAACTTGTACAAGCGGTCAAAATTATATGATGCTCGGAACTCCTCGTCTATTCTCTCTAGAGATGCTCGTACAAGACGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAGAGGATGGAACAATTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCAAACTCCTGTGACTTTTTTATGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTATTACAGTGGGCATGGGTTGAGCTATGTCAAGGAGGACATCAGTAGAATGTGCCGGGATGCAATAAAAGCAAAGACTCGGGGTGATGGTGGTGATATGAATCATGTTATCACATTATTTATTCAGCTTGCAAGACGGTTGGAGGAGAATTCCAAGTATGTGAATAGCAGAGATGCACTAATGAAGTTGTGGGGAAATGATCCCCCATCGTCTTTATGTTCTACTTCCTCTAAGTACAAGAAGAGTAAGGAGAATAGATTGTTATCTGAGAGGAAGCATAGGAATAATGAAACACATGGTGGTTTGGATAATGGAGAATATGCTTCTGATAGAGAAATCAGGAGGCGTTTATCAAAGTTGAATAAGAAATATTTCAACTCGGAGAGTGAGACATCTGATGACTTTGATAGATCTTCTGAAGATGGCAAGAGTGATAGTGATACTACCACCACTGACACTGAAAGCGACCAAGATGTCCATTCAGAAAGTCGAATTGGGGACTCGAGAGGAGATGGGTATTTCACACCTGATGATGGGTTGCATTTCATTACTGATGAGCGTGAATGGGGGGCTCGCATGACGAAAGCAAGTTTGGTTCCTCCTGTTACTCGGAAGTATGATGTCATTGATCAATATATCATTGTAGCTGATGAAGAGGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGCTGAGTGCGCAAAAGAATGGCATTGAGGAGTCTGACATGGAACTGCCTGAAGTCAAGGATTACAAACCTAGAAAACAGCTTGAAAATGAGGTTGTTGAGCAAGAAGTTTATGGCATTGATCCCTATACCCACAATCTTTTACTGGATTCTATGCCAAAGGAGTTGGATTGGTCTCTACAAGAGAAACATTTGTTTATAGAAGACAAGCTCCTTCGGATGTTGAATAAGCAAGTTAAGCATTTTACTGGAACTGGAAACACTCCAATGAGCTACCCTTTGCAGCCTGCTATTGAAGAAATTGAAAGGTATGCAGAGGAGCACTGTGATGCGAGGACAGTAAGAATGTGTCAAGGTATATTAAAAGCCATAAAAAGTCGTTCGGATGACAAATATGTAGCTTACAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTTTAGGAGAGGTCTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAGAATAGTGATGATCCAGCACCGGAGTTCTATAACATCTACCTTGAAAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTCGTCGATGCCATGCATAAGGCTAACTATGCCAGTCGGATATGTCATTCATGCCGACCGAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCATTATCAAATTGGTATTTATAGTGTTCGTGAAATCCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCTTCAGTTTGTTTGTGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTGAATCTAACTGGCGAAGGGGCTTTCGAAAAGGTACTGAAGGAGTGGCATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCTGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTAGTTTCCTATGCAGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACTAAACTTCCTGAGGAAATTTTAAAGCATAATCTTGAAGAGAAAAGAAAATATTTTTCAGATATCTGTCTTGAAGTTGAAAGGAGTGATGCAGAGGTTCAGGCTGAAGGTGTATACAATCAGAGGCTTCAAAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGCGATGTATTTTTGGTGATCCACTGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAAGAGCTTCTTCAGTGCCTGGCCCCTTATGTTGAAGAGTCTACATTGAATGATCTTAAGTCCAAAATTCATGCTCATGATCCTTCAAGTTCTGGAGATATTCAAAAGGCAGTTCAAAAATCTCTTTTGTGGTTGAGGGATGAGGTTCGAAACCTTCCTTGTACATACAAATGCCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAAGTACTTCTTTAGAATACAGGATTATCAAACTATAACATCACCACCCGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTATGCTGACAAATTGGGAGCAGGATTTCAGGAGTATCGAAAGATATACGGTGAAAATTATTGTTTAGGGCAACTGATTTTTTGGCATAATCAGAGTAACGCGGAGCCAGATTGCACCCTGGCTAGAATAAGCAGGGGTTGCTTGTCATTACCAGACATCAGTTCCTTTTATGCCAAAGCTCAGAAGCCTTCACGACATCGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGGATGGAGAAGCAGCCCCAAAAACCTTGGCCCAAAGATCGGATTTGGTCATTCAAAAATTCTCCGAAATATTTTGGCAGCCCAATGTTAGACGCTGTAATTAATAACTCTCCACTTGACAGAGAGATGGTTCATTGGTTGAAGCACAGACCTGCAATATTCCAGGCCTTGTGGGACCAGTGA 7185 0.4239 MGDGGVACMPLQQQHVIERLPNAAAEKALCGGKSGNGFDSGLLKVAGKRKKKVKVKKKVSPAAKKVVKSELTVDGVGSRGGNDVESGEVCGEMDEVEEGELGTLGCELENGEFVPEKPVMLMRRSEIENGEIVSERWKKGEVERGEFVSGKWRKEEDVEKGEIVPEKGRKGETEKWEYGSWRGGMKDDIEKGEFIPDRWHRGDMGRDDYGYARIRRYQPGRDKGWKNEREHTPPSGRYYTGDEHFRKKELNRSGSQHAKSAPRWESGQERNIRISSKIVDEEKNEHSNSRTHMRDYSSGNRLKRHGNESEGCERKNYGDYAGSKSRRLSDDSPRLAYSEHYSRLSVERSYRNSSSKSSADKYSSRHHESLPTRSVYDKHGRSPGNSERSPHDRARYYDHKDRTPVRPSPYSCDRSPYSSEKSPHGRERSPYNRNWDRSRHHDHKMRSPTHAERSPQDRGRHHDRRDPTPNLIEQSPHDRTRSNMHREINSKISSSEKHNSQHSCKDYEDKHVQKEANLSDVESQGERNVHNASKSFEIDVCSEPEKEQQSSNPTVSCKGSPCLEPLPEELASMEEDMDICDTPPHVPVVVDSSSGKWFYLDYNGVEHGPSKLSDIKVLVDDGVLMSDHFIKHIDSDRWLTVENAVSPVTAQSFLSVVSETITQLVNPPEAPGNLLADTGDILQSGPENYLGIPTPILQPMLCSEDSGIASVLLEDLHIDERVGVLLEGYDVIPGREFEAIKESLQMNFEYAKWEGLEECEGFPGHDTCLRMEHDSRIDSSREYESQVSIPSGKENGFTLGVPGDWFSAQWSCKGGDWKRNDDAQDRYCNKKLVLNDGFSLCQMPKSGCEDPRWTRKDDLYYPSHSRRLDLPVWAFCTDERGDCSTLSKPVQTKLASVRGVKGNILSVVRINACVVKDQGSLVSESCHKTRSKDRYPSRSTWSFSSTSYSKRSSTEEDSQSKASNDQGSLGSCRSMEFINIPKDYCRTVHDLQLHSGNWYYLDGSGRERGPSSFSELQRLVDQGIVKKYSSVFRKCDKLWVPVTSSAETYDFDVSLRSHQESSTLSGECSGLPSKQIHGASVGEHDSKSNLFNSLQPQFVGYTRGKLHELVMRSYKSREFAAVINEVLDPWINTRQPKKETEKQTYWKSEGDGHASKRARMLVDYSEEDSDFEDGSLPNWKDESTFEALCGDATFSGEGSDITDPNVGSWGLLDGCMLSRVFHCLRSDLKSLAFASMTCKHWRATVRFYKKVSRHVNLSSLGHSCTDSIMWNILNAYEKDKIESIVLIGCTNITAGMLEKILLLFPGLSTVDIRGCSQFGELTLKFTNVKWIKSHSSHITKIASESHKIRSVKQFAEQTSSVSKVSILGIRDDFGELKDYFDSVDKRDTAKQLFRQNLYKRSKLYDARNSSSILSRDARTRRWSIKKSESGYKRMEQFLASRLREIMKANSCDFFMPKVAEIEAKMKNGYYSGHGLSYVKEDISRMCRDAIKAKTRGDGGDMNHVITLFIQLARRLEENSKYVNSRDALMKLWGNDPPSSLCSTSSKYKKSKENRLLSERKHRNNETHGGLDNGEYASDREIRRRLSKLNKKYFNSESETSDDFDRSSEDGKSDSDTTTTDTESDQDVHSESRIGDSRGDGYFTPDDGLHFITDEREWGARMTKASLVPPVTRKYDVIDQYIIVADEEDVRRKMRVSLPDDYAEKLSAQKNGIEESDMELPEVKDYKPRKQLENEVVEQEVYGIDPYTHNLLLDSMPKELDWSLQEKHLFIEDKLLRMLNKQVKHFTGTGNTPMSYPLQPAIEEIERYAEEHCDARTVRMCQGILKAIKSRSDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSDDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVREIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFEKVLKEWHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVSYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPLKAPPPLEKLSPEAVVSFLWKGEDSFVEELLQCLAPYVEESTLNDLKSKIHAHDPSSSGDIQKAVQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQDYQTITSPPVYISPLDLGPKYADKLGAGFQEYRKIYGENYCLGQLIFWHNQSNAEPDCTLARISRGCLSLPDISSFYAKAQKPSRHRVYGPRTVRSMLARMEKQPQKPWPKDRIWSFKNSPKYFGSPMLDAVINNSPLDREMVHWLKHRPAIFQALWDQ* 2395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0839 2394 MobiDBLite consensus disorder prediction 931 968 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 221 483 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 1547 1577 - -
Gso12g0839 2394 Coils Coil 504 524 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 221 254 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 419 483 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 936 968 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 274 337 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 1596 1635 - -
Gso12g0839 2394 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1975 2394 IPR045606 -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 360 407 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 1537 1577 - -
Gso12g0839 2394 SMART set_7 1830 1970 IPR001214 GO:0005515
Gso12g0839 2394 CDD SET_SETD2-like 1838 1986 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 1596 1645 - -
Gso12g0839 2394 MobiDBLite consensus disorder prediction 541 560 - -
Gso12g0839 2394 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2394 - -
Gso12g0839 2394 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2394 - -
Gso12g0839 2394 SUPERFAMILY SET domain 1839 1987 IPR046341 -
Gso12g0839 2394 ProSiteProfiles SET domain profile. 1825 1964 IPR001214 GO:0005515
Gso12g0839 2394 Pfam SET domain 1876 1964 IPR001214 GO:0005515
Gso12g0839 2394 Gene3D SET domain 1809 1995 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0839 Gso-Chr12 9124603 9142310 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso12g0839 SET 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0839 K22748 - gmx:100815409 4799.96