Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0833 ATGGTTGAACGGAAGCAGTTCAAGACGAAGCTATGCGTTCTGTATCAGAGAGGTCGCTGCAATCGCCATAACTGCTCCTTCGCGCATGGGAGTGCTGATCTTCGACGATTCTCTGCCTCGTATAGTGGGAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTATGTATCTCCTCAAAGGTACTCACCAGCTCCAGATACAAGAGGCCGCCAGATCATCCGTGAATACAGTCCTACAATGTCTTTGGAGAAAAAAAGTGACAGGAGACATAGGAGAAAACAGGATACTAATGGCCAAAGTGATATTTCTGGAAATTTGAAAGTCTCAGATAGAGTTCAAGGTCAAGTTAAAGAAGGAAAATTGCTTTCCTCTGGTTCTAGGAATAATCTTGAGGAGCAGCTGAAGAAAGTAGATTCAGATATCAGCACTCTTCAGAACCGAAAATTCCAGCTAGAGGTCTATCTTGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCGGGAACTTGAAGCTCAACTATGCAAAGAGGATGAGGAGTGCAAAAGAATTACTTCAAGAATAAGGAAATTTGTAAGAGTGCACAATCATATGTCAGAGTTACAAGATGAACTGAGGAGATCACAAGTCCGACTTCAAAGGTTTGGAGATCAGCTTGTCTCAGACATTTCTAGAATTGGTGCCAACGAAGAAGATTTAAGCATTGATATTATAAGCAATGGTGAAAATACTGGTCTTCATCCAATCGCTAAACATAATGTGGAGCACAATGATGCATCTTCCCACAAAAAAAGGCTGCATATTGAACATGATGCTTTGGAAGAGTTAAAACAGGATAGATCAAAAGATGGGCATTTGGTTGAGACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATTTATCAGATCAATTGAAAGAGGAGTCTCTTGGTACTCCAGACAATGGAACTGAAGTTACTAGATCTCTAGATCTTGAAGGCAAGCACGAGAAAGGATTGAAGCAACCCAGAATTGAAGCGCCATCAACCAGCATGGCAGCTCATGTGGTTGACGAGGATGTTGATATTGAACGTTATGATGGAAATGATATCAATGAAACTGCAAATACGGAAAATGATAATGGAGCGGCATATAAGGTAAAGGGTGCACCATTAATGCTTCCCCCAGCTTTGCTACCTCGTAGCAATTACCTGCAGTATGAAGGCAACGACGAGAATGTTGATGTGGATGGTTGA 1254 0.4163 MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSADLRRFSASYSGRRDYLGNDLRDKLDRRYVSPQRYSPAPDTRGRQIIREYSPTMSLEKKSDRRHRRKQDTNGQSDISGNLKVSDRVQGQVKEGKLLSSGSRNNLEEQLKKVDSDISTLQNRKFQLEVYLDESVQEVDSLNSRIRELEAQLCKEDEECKRITSRIRKFVRVHNHMSELQDELRRSQVRLQRFGDQLVSDISRIGANEEDLSIDIISNGENTGLHPIAKHNVEHNDASSHKKRLHIEHDALEELKQDRSKDGHLVETARTRKRSRWNLSDQLKEESLGTPDNGTEVTRSLDLEGKHEKGLKQPRIEAPSTSMAAHVVDEDVDIERYDGNDINETANTENDNGAAYKVKGAPLMLPPALLPRSNYLQYEGNDENVDVDG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0833 417 MobiDBLite consensus disorder prediction 86 102 - -
Gso12g0833 417 Coils Coil 160 180 - -
Gso12g0833 417 Coils Coil 132 152 - -
Gso12g0833 417 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Gso12g0833 417 MobiDBLite consensus disorder prediction 86 115 - -
Gso12g0833 417 Coils Coil 205 225 - -
Gso12g0833 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 IPR045868 GO:0046872
Gso12g0833 417 Gene3D - 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0833 Gso-Chr12 8972592 8981030 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gso12g0833 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0833 - - gmx:100811131 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0833 12 8972592 8981030 Gso12g0833 12 8972592 8981030 ECH