Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0831 ATGGGTAGCCAGAGTTGCTTCAAGGCTTTGATTATTTGCCTTATAGCATTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCCGAGAAAATAATTTTGAAGTATGTTGTAGAGCATATCCGCAATGCTCCATCACTAGCAGCTGCTCTCATAAGAATGCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTGTGGACTCAACACCAGGCAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACACTCCGAGGCTTTGGTTTCATTGACGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATATCTTGGCCTTGACCGCCAGAGACTCTATTCATGCCACTGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGATGGGCTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTGCCTGCTCCATTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAACGACCTTGTCTTGCTTGTTGGTGCTCACACAATTGGTGTTGCCCATTGTTCATCAATTGCAACTCGTCTATACAATTTCACTGGCAAGGGTGACACAGATCCAACACTAGACAGTGAATATGCAAAAAATATCAAAACTTTTAAGTGTAAGAACATTAATGATAATACAATTATTGAGATGGACCCTGGAAGTCGCGATACATTTGATCTTGGATTTTATAAACAAGTTGTTAAGAGAAGGGGCTTGTTTCAGTCAGATGCTGAATTTCTTACTAGCCCTATCACAAGGTCTATTATCGATAGACAACTTCAATCAACTCAAGGATTCTTTGAGGAATTTGCCAAGTCTATCGAGAAAATGGGACGAATTAATGTCAAGCTTGGAACTGAAGGGGAGATAAGGAAACATTGTGCACGAGTTAATAACTAA 975 0.4185 MGSQSCFKALIICLIALIGSTQAQLQLGFYAKSCPKAEKIILKYVVEHIRNAPSLAAALIRMHFHDCFVNGCDGSVLVDSTPGNQAEKDSIPNLTLRGFGFIDAIKRLVEAECPGVVSCADILALTARDSIHATGGPYWNVPTGRRDGLISRAADPLRSLPAPFHNLTTQLTLFGNVGLDANDLVLLVGAHTIGVAHCSSIATRLYNFTGKGDTDPTLDSEYAKNIKTFKCKNINDNTIIEMDPGSRDTFDLGFYKQVVKRRGLFQSDAEFLTSPITRSIIDRQLQSTQGFFEEFAKSIEKMGRINVKLGTEGEIRKHCARVNN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0831 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 Gene3D - 28 323 - -
Gso12g0831 324 PANTHER PEROXIDASE 3 323 - -
Gso12g0831 324 Gene3D Peroxidase, domain 2 161 302 - -
Gso12g0831 324 PANTHER PEROXIDASE 25-RELATED 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Gso12g0831 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso12g0831 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gso12g0831 324 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0831 324 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0831 Gso-Chr12 8952776 8955287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0831 14 324 Peroxidase AT1G05260 64.537 7.76e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0831 K00430 - gmx:100784922 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0831 12 8952776 8955287 Gso12g0831 12 8952776 8955287 ECH
Gso12g0831 12 8952776 8955287 Gso6g2488 6 46641863 46644522 GST
Gso12g1650 12 40108890 40111145 Gso12g0831 12 8952776 8955287 PCT
Gso11g3216 11 47917669 47919567 Gso12g0831 12 8952776 8955287 PCT
Gso12g0831 12 8952776 8955287 Gso12g1650 12 40108890 40111145 PCT
Gso12g0831 12 8952776 8955287 Gso11g3216 11 47917669 47919567 PCT