Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0830 ATGGGGAGCCAGAGTTACTTCAAGGCTTTGATTATTTCTTATAGCACTAATTGGATCAACTCAAGCTCAGTTGCAGCTTGTAGTAAAAGTAAAAGGAATGTTGGACTTGATGTAAACGACCTTGTCTTGCTTTCTGGTGCTCAGACGATTGGTGTTTCCCATTGCCCATCAATTGTAACCCATTTATATAATTTCACTGGCAAGGGTGACACTGACCCGACTCTAGACAATGAATATGCAAAAAATCTTAAGACCTTTAAGTGCAAGAATATCAATGACAACACCACACTTATTGAGATGGACCCCGGAAGTTGTGACACATTTGATCTTGGCTATTATAAACAAGTGGTTAAGAGAATGGGCTTGTTCCAATCAGATGTTTCATTGCTTGAAAGCTCTAACACAAGGGCTATTATCATCAGACAACTTCAATCAACTCAAGGATTCTTTGCAGAATTTGCCAAGTCCATGGAGAAAATGGGACGAATTAATGTCAAGATCGAAACAAAAGGAGAGATACGGAAACATTGTACACAAATAAATAGCTAA 549 0.3843 MGSQSYFKALIISYSTNWINSSSVAACSKSKRNVGLDVNDLVLLSGAQTIGVSHCPSIVTHLYNFTGKGDTDPTLDNEYAKNLKTFKCKNINDNTTLIEMDPGSCDTFDLGYYKQVVKRMGLFQSDVSLLESSNTRAIIIRQLQSTQGFFAEFAKSMEKMGRINVKIETKGEIRKHCTQINS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0830 182 Gene3D Peroxidase, domain 2 20 160 - -
Gso12g0830 182 PRINTS Plant peroxidase signature 39 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 PRINTS Plant peroxidase signature 99 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 PRINTS Plant peroxidase signature 115 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 PANTHER PEROXIDASE 32 181 - -
Gso12g0830 182 PANTHER PEROXIDASE 25-RELATED 32 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 SUPERFAMILY Heme-dependent peroxidases 32 181 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 ProSiteProfiles Plant heme peroxidase family profile. 33 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0830 182 Pfam Peroxidase 21 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0830 Gso-Chr12 8911744 8913941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0830 33 182 Peroxidase AT1G05260 60.927 9.25e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0830 K00430 - gmx:100808444 353.984