Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0777 ATGGACGTTGATTCCTCGATGGTGCCGGAGCCCGATCACGATCCGCCGGTGCAGAACCATGCCGAGAGAGACCAGCTAGGAGAGTCACCGTCGCCGCCGCCGTCGGAGGGAGGCGGATCTCCGGCGCAACCGCACCAACAGCCGCTGCCTCCGACGGCGGCTCAGGTGCAACAGCCCAATCCGCTGGTTGGTCCGAGGCTCGCGCCGACTTACTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGACGGGCCGGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTTGGAGAGGAGGGGACGCCGGGGTACATTGGCCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCGCTTGAAGGGAATTCCGCGGTCTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACTGCTGATATCCACTGTTATGATGTCATAACTAATAAATGGTCTAGGATAACTCCCATTGGCGAGCCTCCATCCTCAAGGGCTGCACATGTGGCAACTGCTGTTGGAACCATGGTAGTTATTCAGGGTGGCATTGGCCCTGCTGGTTTGTCTGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCCAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGACGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGCTGGGAATGGGCTATTGCTCCTGGTGTGTCACCATCTCCTAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCCCTTGGAGGAGGACGCATGGTTGAAGATTCATCGAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGGACGGGTAGATACAGTGCTGATGCAGCAGGTGGAGATGCTGCAGTTGAGTTGACACGGCGTTGTAGGCATGCGGCTGCTGCTATTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGTGGTGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACTGCTGCTTCACATGCTGCTGCAGCAGCAGCAGCATCTAATGTACAGGCCGGACGGCTACCTGGACGGTATGGATTTATTGATGATAGGACAAGGCAAACCATGCCTGAAACAGATCCTGATGGTTCAGTAGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGCGACATGTATACTGATATCAGCACTGAAAATGCCTTGCTCCCGGGATCTAGAATTTCGAACAGGCGAACGAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCTAAGGCACGGCAAGTGAACGGTGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCAACACCTAGCGGGAAACAAATATCTTCCTTGATTAAGCCTGATTCTGCTGGGTCAAATAGCATTCCTCCTGGTGGAGTGAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGCGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGACCAGTTTGAGAATGAAGGCAGGCGGGTCAGTTATGGGACTCCTGAAAGTACAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTTGTAGCTCACCTTTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGTCGACAGTTTTTCTTGGACTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAACGCATATTTTCAAGTGAACCGAGCGTGTTACAGCTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATTGACTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATCAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCACCGTATAAACCGTCTGTTTAATTGGCTTCCTCTGGCTGCCCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGCCGTTCAATAAATCATGTGGAACAAATTGAAAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTTATGGATCTATTATGGTCTGATCCTACGGAGAATGACAGTGTTGAAGGGCTGCGGCCAAATGCTAGGGGTCCAGGATTAGTCACTTTTGGGCCTGATCGAGTAATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGGCATTTGATCACACTTTTCTCTGCTACAAACTACTGTGGTACGGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTCGTTGTGGTTCCTAAATTGATTCATCCATTACCGCCTGCAATTTCTTCACCAGAAACGTCACCGGAACGTCATATTGAGGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCTCAAGTAACAAACGACCGAGCATGA 3003 0.4992 MDVDSSMVPEPDHDPPVQNHAERDQLGESPSPPPSEGGGSPAQPHQQPLPPTAAQVQQPNPLVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAVSGTPSSAGNAGIRLAGATADIHCYDVITNKWSRITPIGEPPSSRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAASHAAAAAAASNVQAGRLPGRYGFIDDRTRQTMPETDPDGSVVLGNPVAPPVNGDMYTDISTENALLPGSRISNRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSAGSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESTTAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRA* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0777 1000 SUPERFAMILY Metallo-dependent phosphatases 660 965 IPR029052 -
Gso12g0777 1000 MobiDBLite consensus disorder prediction 1 67 - -
Gso12g0777 1000 Gene3D - 66 265 IPR015915 GO:0005515
Gso12g0777 1000 Gene3D - 266 455 IPR015915 GO:0005515
Gso12g0777 1000 Gene3D - 638 977 IPR029052 -
Gso12g0777 1000 SUPERFAMILY Kelch motif 143 432 IPR015915 GO:0005515
Gso12g0777 1000 MobiDBLite consensus disorder prediction 549 588 - -
Gso12g0777 1000 Pfam Kelch motif 329 375 IPR011498 GO:0005515
Gso12g0777 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 999 - -
Gso12g0777 1000 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Gso12g0777 1000 PIRSF STPPP_BSU1 36 1000 IPR012391 GO:0004721|GO:0009742
Gso12g0777 1000 MobiDBLite consensus disorder prediction 566 580 - -
Gso12g0777 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 999 - -
Gso12g0777 1000 CDD MPP_Bsu1_C 654 956 IPR041758 -
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 838 865 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Gso12g0777 1000 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Gso12g0777 1000 MobiDBLite consensus disorder prediction 980 994 - -
Gso12g0777 1000 MobiDBLite consensus disorder prediction 34 48 - -
Gso12g0777 1000 SMART pp2a_7 674 958 IPR006186 GO:0016787
Gso12g0777 1000 MobiDBLite consensus disorder prediction 978 1000 - -
Gso12g0777 1000 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Gso12g0777 1000 Pfam Galactose oxidase, central domain 223 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0777 Gso-Chr12 8028120 8042455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0777 666 901 Calmodulin-binding Proteins AT5G63870 29.044 1.94e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0777 - - gmx:100788485 1894.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0777 12 8028120 8042455 Gso11g1332 11 14729711 14744206 GST
Gso12g1597 12 39503663 39515553 Gso12g0777 12 8028120 8042455 PCT
Gso11g3257 11 48357809 48368342 Gso12g0777 12 8028120 8042455 PCT
Gso12g0777 12 8028120 8042455 Gso12g1597 12 39503663 39515553 PCT
Gso12g0777 12 8028120 8042455 Gso11g3257 11 48357809 48368342 PCT