Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g0772 | ATGGGGTTTTCGCTCAAAGAGGCTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTCTGGAAGATCGGTTGTAATAATTCCAAGTTGTTAATCTGGGAAGATTACTACTACGAACCCTTGCCCTCTCCTTTCCCTCCACGAACTGTTGGGAGGTCTAATTTTCCTTACCAAGATGAGGAAGGATGTTGGTTTTCTTCTGAGTCTCAGCTAGGGATTCAGGAGGAGGACAGAGTCCGTGTATTGATCAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATAGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCTTATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACGGTGGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTAGGTTCTTTCTCGCCGATAATGGAAGATATAGGATTTGTGAATGATGTAAAGAACTTTATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAAATTCGCTGGACCTGTGACCGTTGATCCACCTGTCATTACTTCAAACTGCACTCCCTCGGTAGCTAATGGTTCCAACCAACTTACTAATTCTCCTCTTGCTTCAAGGCCTGTTGCTCAGCCACCTCATCCTCTAAGGGGAGGAATAAATAATTACCAGGGTTCTTTATTGACACCTCAAGCCTATAACCCGAACCAGGTATTTGATGGCATTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGTCTGTGGCCAACCAAAGAAGACCATTGTTGAGGCTGAAGCTAAGGTGATACCTACAAATTTTGATTCATGTCTGCAACAACATTCTGTTTATAATGCTAGATCTGCATTCAATGAGTTATCTAGTTTCAATCAATCAAATCTGAGTGACGGCAGCCTTAAATATATGGAACAACAAACATCAGGTGTTGGGAGACAGAGTCAAGTTATTCCTAACGTGAATCCATCAAGTGCCTTAAATATGCCTCGGCTGAAAATCGATGGAGGTAAAATTCTTGAACAGAATCAGAGTTCTAGTGGCAGTTCACTACTCGGAGGAATCCCAATATGTAGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCACTTTCAAATCCTCCCAAAGTATCCACTAACACTTCTGATTTTTCTGGAATGTACAAGGTTGGGTTTGGACTCCAAAGTAACAATACAACAACTAATGCTGTGCTTTGTTCTGTGCCTAATTTCACTAATCAATCAGTTACCAATCACATGAATCTAGAAGGCTCTGGTCAGAAAAGTCTTTCCATTGATTTAAAGCAAGTGTGGGATGCCTTTGCGTCAACTGATCAAAGGATAGATGATGATTTGCTTCAGGCCGCCCTTAAGATTCCATCTCTTCATCTGGAGGAGCATGTGCCTATGGGTGATCACATCTCTGGTTTTGTTCAAGATTGCCTCAGTAAAGATCTTACTAGTCAACATATGATGAAAATGAATGTTAAGCATGCAGAAGCCGATGCTCAACTTCCATCAGGTGATGACCTCTTCGATGTTTTGGGCGTGGATTTGAAAAGGAGACTACTCAATGGAAACCGGAATGAGTTGCTTGCCACTGATTCAGATGCCATCACAGAACATCTAGATAAAAAGGCAACACACATGAATTTGCAAGGTGTAGGTCCTAATAATAGTTATTCAGTTAATGAAGCTATATCAGAAAGTGGCATCTTCTCTGGAACGGACACAGACCACCTTTTAGATGCTGTGGTTTTAAAAGCTCAATCTGCTGCAAAACAGAATTCTGATGAAATGTCATGCAGGACAACATTGACAAGGATTAGTACCGCCTCAATTCCTTCTCCTGTCTGCAAGCAAGTTATGCCTGATCATGTTGCCCCGAGGGGATTGTTTGATTTTCCTAAGACCGGAGTTAAAACAGCTTCTGCAGAAACAAGTTCTCTTAGGTCTGGGTGTAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTTCCATATATGGGTCTAAGCTTAGTTCATGGGTTGAGAATAGTAGTAATTTTAAACGTGAAAGCAGTGTTTCAACTGGATACTCCAAGCGACCAGATGAAGTTTGCAAATCAAATCGTAAAAGACTTAAACCAGGAGAGAACCCTAGGCCTAGGCCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTCAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGTGCACAATCAATGGTTTGTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACCAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACGGTGAAGGGTGGTGCATCTTCGTCGAATGCAATTGATAACAACATGATGCTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGCAGGCCTAGTAGTTTGCAATGA | 2874 | 0.4203 | MGFSLKEALRTLCSRNRWSYAVFWKIGCNNSKLLIWEDYYYEPLPSPFPPRTVGRSNFPYQDEEGCWFSSESQLGIQEEDRVRVLINKMMVNNSVSIAGEGIVGRAAFTGNYQWILLNNFTRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQLGSFSPIMEDIGFVNDVKNFILQLGCVPGALLSEDYSAKVSNEKFAGPVTVDPPVITSNCTPSVANGSNQLTNSPLASRPVAQPPHPLRGGINNYQGSLLTPQAYNPNQVFDGICQPKAHSMIKTNVCGQPKKTIVEAEAKVIPTNFDSCLQQHSVYNARSAFNELSSFNQSNLSDGSLKYMEQQTSGVGRQSQVIPNVNPSSALNMPRLKIDGGKILEQNQSSSGSSLLGGIPICSGSNLLRTNMINCSLSNPPKVSTNTSDFSGMYKVGFGLQSNNTTTNAVLCSVPNFTNQSVTNHMNLEGSGQKSLSIDLKQVWDAFASTDQRIDDDLLQAALKIPSLHLEEHVPMGDHISGFVQDCLSKDLTSQHMMKMNVKHAEADAQLPSGDDLFDVLGVDLKRRLLNGNRNELLATDSDAITEHLDKKATHMNLQGVGPNNSYSVNEAISESGIFSGTDTDHLLDAVVLKAQSAAKQNSDEMSCRTTLTRISTASIPSPVCKQVMPDHVAPRGLFDFPKTGVKTASAETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENSSNFKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGAQSMVCPIIVEDLNPPRQMLVEMLCEECGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNAIDNNMMLYHSFPQATQIPATGRPSSLQ* | 958 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g0772 | 957 | MobiDBLite | consensus disorder prediction | 722 | 758 | - | - | |
Gso12g0772 | 957 | MobiDBLite | consensus disorder prediction | 219 | 235 | - | - | |
Gso12g0772 | 957 | CDD | bHLH_AtLHW_like | 748 | 817 | - | - | |
Gso12g0772 | 957 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 5 | 175 | IPR025610 | - | |
Gso12g0772 | 957 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 744 | 793 | IPR011598 | GO:0046983 | |
Gso12g0772 | 957 | PANTHER | TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED | 1 | 957 | IPR043561 | GO:0003700|GO:0006355 | |
Gso12g0772 | 957 | MobiDBLite | consensus disorder prediction | 734 | 758 | - | - | |
Gso12g0772 | 957 | MobiDBLite | consensus disorder prediction | 219 | 249 | - | - | |
Gso12g0772 | 957 | PANTHER | BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN | 1 | 957 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g0772 | Gso-Chr12 | 7841134 | 7848368 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g0772 | 545 | 932 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G27230 | 54.061 | 1.12e-115 | 367 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g0772 | - | - | gmx:100786351 | 1897.48 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g0772 | 12 | 7841134 | 7848368 | Gso11g1341 | 11 | 15060441 | 15067672 | GST | |
Gso12g1590 | 12 | 39393878 | 39401548 | Gso12g0772 | 12 | 7841134 | 7848368 | PCT | |
Gso11g3264 | 11 | 48459878 | 48467172 | Gso12g0772 | 12 | 7841134 | 7848368 | PCT | |
Gso12g0772 | 12 | 7841134 | 7848368 | Gso12g1590 | 12 | 39393878 | 39401548 | PCT | |
Gso12g0772 | 12 | 7841134 | 7848368 | Gso11g3264 | 11 | 48459878 | 48467172 | PCT |