Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0706 ATGGAGTCTCAAGACCTCACCGACCACCTCCACAGCCTCAGCTTCACTTCCACCACCGCAGAAATCAAACGCAGCACAAGCTTCAGCTCCTCAACCACCACCTCAACCTCCTCCCACTTCAACACCCCACTCCCCAACGCCAAGCCCCACGCGCCCTCCTTCCTCCAACGCCCCCTCTCCCTCTCCGACCTCCACTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTACTTGGCGGTGCCCAAGGAAAGCGCTGGAGCCGGCGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGCAGAGCGAGGACAGAGAGGGAAATTCTGGAAATGTTGGATCATCCTTTCTTGCCCACGCTCTACGCCTTCATCCACGCGCCTAAGTGGCTCTGTTTCTTGACGCCGTTCTGCCCCGGCGGTGACCTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTATGCATCGGAAGTGTTGTTGGCTCTTGAATACCTACACATGTTGGGGGTAATCTACCGCGACCTGAAGCCCGAAAACGTGTTAATCAGATCAGACGGCCACATCATGCTCACAGACTTCGACCTTTCCTTAAAATGCGACGATTCCACATCAACGGCACAAATCATCTCCGATCAAAACCCTCCCCGCACAGTCCCACGCAACGATTCCCACGTGGAACCCACACGTGCCACTTCTTCATGCATGATCCCCAACTGCATAGCCCCCACGGCCTCATGCTTCCACCCAAAACGCAAGAAAAAGAAGAAACAAACCCATTTTAATGGGCCCGCCTTCGTGGCCGAGCCCGTTAACGTCCGGTCCATGTCGTTCGTGGGGACCCACGAGTACTTGGCTCCGGAGATCGTGTCCGGTGAGGGACACGGTAGCGCCGTGGACTGGTGGACGTTGGGAATATTCATGTTCGAACTGTTTTATGGTGTGACACCGTTCAAGGGCATGGACCACGAGCTAACCCTGGCGAACGTGGTGGCTCGGGCCCTCGAGTTCCCGAAGGAACCGGCGGCTTCGGCAGCCATGAAAGAGCTTATCTCGCAGCTGCTGATTAAGGACCCGGCGAAGAGACTGGGGTCGGTGATGGGGGCCTCCGCGATCAAGCACCACCCGTTCTTTCAAGGCGTGAATTGGGCGTTGCTGAGGTGTACCACTCCTCCATTTGTTCCCCCACCTAGTAGTGCCAAAGCTATATATGATGATCATCAAACTTGTCCTGAGATTTTCATTGACTGTTATTAA 1311 0.5683 MESQDLTDHLHSLSFTSTTAEIKRSTSFSSSTTTSTSSHFNTPLPNAKPHAPSFLQRPLSLSDLHFTRRLGSGDMSAVYLAVPKESAGAGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYAFIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPPRTVPRNDSHVEPTRATSSCMIPNCIAPTASCFHPKRKKKKKQTHFNGPAFVAEPVNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANVVARALEFPKEPAASAAMKELISQLLIKDPAKRLGSVMGASAIKHHPFFQGVNWALLRCTTPPFVPPPSSAKAIYDDHQTCPEIFIDCY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0706 436 MobiDBLite consensus disorder prediction 24 52 - -
Gso12g0706 436 Pfam Protein kinase domain 65 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0706 436 Pfam Protein kinase domain 293 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0706 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Gso12g0706 436 ProSitePatterns Protein kinases ATP-binding region signature. 70 97 IPR017441 GO:0005524
Gso12g0706 436 PANTHER FLIPPASE KINASE 1-RELATED 3 436 - -
Gso12g0706 436 PANTHER OS11G0150700 PROTEIN 3 436 - -
Gso12g0706 436 Gene3D Transferase(Phosphotransferase) domain 1 292 414 - -
Gso12g0706 436 Gene3D Transferase(Phosphotransferase) domain 1 152 227 - -
Gso12g0706 436 SMART serkin_6 64 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0706 436 ProSiteProfiles Protein kinase domain profile. 64 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0706 436 SUPERFAMILY Protein kinase-like (PK-like) 37 422 IPR011009 -
Gso12g0706 436 MobiDBLite consensus disorder prediction 24 44 - -
Gso12g0706 436 Gene3D Phosphorylase Kinase; domain 1 63 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0706 Gso-Chr12 7053159 7056863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0706 5 436 AGC Kinase Gene Family AT3G44610 64.588 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso12g0706 Pkinase 3.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0706 K08286 - gmx:100811470 850.121