Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0697 ATGAGATTGGAGAAGTGTTGGTTCTGTTCTTCTACCATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGATTTTTCGGTTTTGTAGATCTAAATGCCACAAAAACTTTAAAATGAAGAGGAACCCTCGGAAAGTAAAATGGACAAAGGCATATAGACGAGTGCATGGAAAGGATATGACACAGGACTCGACCTTTGAGTTTGAGAGAAAGCGAAACAGACCTGAGAGATATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCCATTCCAAAGATTGATAAAATCAGAGTCACCAGGGAGGAGAAACACCATAAGAATAGGATGAAAGGCAAGAAGCAGAAGCTGCAAATGGAGGCAGCTAGGGAGTTGGAGCAGGGCATAAGTCTGGTCAAAGCTCCATCTGTGCTTCAAAAGGACCCTTCTCTCACTTTACCCAAGATCAAAGTTGGGGTTTCTCAACAACAATCAGAGGACAATCATCCCATGGAAGAGTGA 507 0.428 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQMEAARELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0697 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Gso12g0697 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Gso12g0697 168 SMART 4TRASH 6 44 IPR011017 -
Gso12g0697 168 MobiDBLite consensus disorder prediction 104 125 - -
Gso12g0697 168 PANTHER BNAA04G10330D PROTEIN 1 168 - -
Gso12g0697 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Gso12g0697 168 MobiDBLite consensus disorder prediction 142 168 - -
Gso12g0697 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Gso12g0697 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Gso12g0697 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 168 IPR000988 -
Gso12g0697 168 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0697 Gso-Chr12 6953394 6956897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0697 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.048 1.73e-81 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0697 K02896 - gmx:100793564 348.977