Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0681 ATGGGTGAGATCTCGTACTCCGATAAGTACTACGACGATACTTATGAATATCGACACGTGGTTCTGCCTCCTGAAGTTGCCAAACTGCTTCCTAAGAATCGACTTCTCTCCGAAAATGAGTGTCGAGCAATTGGGGTTCAACAGAGCCGTGGTTGGGTTCATTATGCAATTCATCGACCTGAGCCACAAATAATGCTTTTCAGGAGGCCTTTGAATTGTCAGGAGCAGCAGCAGGAAAACCAGGCCCAAATTATTTGA 258 0.4574 MGEISYSDKYYDDTYEYRHVVLPPEVAKLLPKNRLLSENECRAIGVQQSRGWVHYAIHRPEPQIMLFRRPLNCQEQQQENQAQII* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0681 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Gso12g0681 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Gso12g0681 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Gso12g0681 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Gso12g0681 85 Gene3D - 1 84 IPR036858 GO:0016538
Gso12g0681 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 82 - -
Gso12g0681 85 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Gso12g0681 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Gso12g0681 85 SUPERFAMILY Cell cycle regulatory proteins 2 77 IPR036858 GO:0016538
Gso12g0681 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 82 - -
Gso12g0681 85 SMART CKS_2 3 72 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0681 Gso-Chr12 6705028 6705658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0681 1 84 Core Cell Cycle Gene Families AT2G27970 84.524 5.14e-49 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0681 K02219 - gmx:100789531 158.303