Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0674 ATGGAATTAATGTTGGTGCCACCACCATGGCTGGAACAACTATTGTCAACCACATTCTTCACCATGTGCGAAAACCACATCAACACACCCAGAAACGAATGCAACATGTACTGCCTCGATTGCAAAGACCAAGCATTCTGTTTTTATTGCAAACAATCTTGGCATAAGGATCATCAAGTAATTCAAATAAGGAGATCGTCCTATCATGATGTTGTGAGGGTAGTGGAGATTCAGAAGGTTTTGGATATCAGTGGAGTTCAGACGTATGTGATTAACAGTGCTAGAGTTCTTTTCCTGAATGAGAGGCCTCAGAATCAGCCTAAGACCAATAGTGTTGTTGGAAGTGGAAAAAGTAACTCCCATTTGTGTGAAATTTGCAGAAGGAATCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGATGCAAGCTTGTAGGAATAAAGAAGAACAGGAATGCGAGCTTTGCCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAATGCACGAAGGAATGCCAAGAAGGTTGCCATCAAAGGAAGAATTGCGTGAAGGAATCCACAAACAAGTATACCAAAGCAAGCCTTCTAATTCACATCTAAGACCATTGTGTTCAAATTCAAGGAGAAGGAAAGGGATACCTCATAGGGCACCTATAGGTCCATAA 663 0.4148 MELMLVPPPWLEQLLSTTFFTMCENHINTPRNECNMYCLDCKDQAFCFYCKQSWHKDHQVIQIRRSSYHDVVRVVEIQKVLDISGVQTYVINSARVLFLNERPQNQPKTNSVVGSGKSNSHLCEICRRNLLDPFRFCSLGCKLVGIKKNRNASFALSAKKDEEIGRMHEGMPRRLPSKEELREGIHKQVYQSKPSNSHLRPLCSNSRRRKGIPHRAPIGP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0674 220 SUPERFAMILY B-box zinc-binding domain 21 65 - -
Gso12g0674 220 MobiDBLite consensus disorder prediction 188 220 - -
Gso12g0674 220 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 218 - -
Gso12g0674 220 Pfam PLATZ transcription factor 64 143 IPR006734 -
Gso12g0674 220 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0674 Gso-Chr12 6594102 6595961 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso12g0674 PLATZ 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0674 - - gmx:100787414 462.996