Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0655 ATGGCCACCATACTCACAAACAGCAGCAAGATTAATAGTGGGCGATTCGGTGTTCTAAAGTTCATAGCACAAGTAATACAAGGTCGATGGTTTATGCTTTGTGCCTCCTTCTTTATCTTGGCAGGAGCAGGTGGAGTCTATGTGTTTGGATCATACTCAGAAGCAATCAAACGTTCACAAGGTTATGATCAAAGCACACTCAACTTTTTAGGGTTTTGCAAGGACCTTGGTGGAAACTTAGGTGCTCCTATTGGTTTCATTGGAGAGGTTACTCCTCCATGGGTAGTACTCCTCATTGGCTCAGTCCTCAACTTTGGTGGCTATTTCATGATCTGGCTTGTGGTCACTGGCAGAATATCCAAACCACACGTGTGGCAGGTTGGTCTCTACATTGCAATTGGTGCTAGTTCTCAGAACTTTGCCAACACTGGAGTAATAACCACGTGTGTCAAAAACTTCCCAGAAAGTAGAGGCACAATATTAGGTATTTTGAAGGGTTACCTTGGACTAAGTGGAGCTATCATGACACAGCTTTACTTGGCCTTTTATGGGAATGATTCTGAGTCTCTCATTCTTCTCATTGCATGGCTTCCTGCTGCTATATCAATTGCATTTGCTTCTGTGATTCGGATCATGAAGATTGGGACTAGGCAACCCAATGAGCAAAAAACAATGAACAACTTTCTTTTTGCACCAATTGTACTTGCATTGTTCATCATGGCAATGATCATTGCTCAGAGACAAATTCCTTTCTCCAAAGCAGCCTATGCTGGAAGTGCAACTGTGGTATGTGTTCTTCTTATTATCCTCCCTTTGTTTATTGCTGTTAGAAAAGAGTTCTCACCGTGGAACATCATGGAAAAAGTACTTGCGCATGCTGCAAATGAGGTAATCATAGAGAAACCACAAATAGTTGAAGCTAAAGAAAAAGCTAAGGATGATCCAAACGGGTCATGTTTTTCCAACATATTCAATAAACCTGAAAGAGGAGAAGATCACACCATTTTGCAAGCACTCTTAAGCATTGACATGTTGTTATTGTTGATTTCATCGTTTGCTGGGTATGGAACAAACGTAACAGTGGTGGACAATTTGGGACAAATTGGTGAGTCCCTTGGATACACTGGCAACACAGTGAGATCATTTGTGTCATTAGTAAGCATTTGGAATTTCTTTGGGAGGGTCTTGTCTGGTTTCGTGTCTGAAATTTTACTTCACAAGTACAAAGTTCCTCGCCCTATGTTGTTGGTCTTTTCGCATTTCGTTACATGCATTGGCCACCTTCTTATTGTGTTCCCAGCACCCGGTTCAGTCTATTTTGCATCGGTGATAATTGGATTTTCCTTTGGTGTAGTGTGGCCAATTTTCTATGCACTCGTTTCTGAACTCTTTGGTCTAAAACATTTTGCCACACTGCAGAATTGTGTGCTTATGGTCATTCCTCTTGCATCATATGTGCTGAATGTTAGGGTCACTGGCTTCTTTTACGATAGAGAGGCAAAAAATCAGCTAATAAAAAGTGGCAAAGAATGGGTGAAGGGCACAGAATTGACTTGCATTGGAACTGAATGCTACAAGCTCCCATTGATAATGATGGCATGTGTCTCTTTTTTCGCAGGAGTGACTTCTTTGATCTTTGTGATGAGGACAAGAGAGTTCTATAAAAGTGACATATATAAGAAGTTCACAGAGAAGGCAGAAACGGAGTTGACTACATCTTCGGTTGTTTGTGACGAAGAGCGCGTGAGTAATAGTGGTGTTGAACGTTGA 1770 0.4141 MATILTNSSKINSGRFGVLKFIAQVIQGRWFMLCASFFILAGAGGVYVFGSYSEAIKRSQGYDQSTLNFLGFCKDLGGNLGAPIGFIGEVTPPWVVLLIGSVLNFGGYFMIWLVVTGRISKPHVWQVGLYIAIGASSQNFANTGVITTCVKNFPESRGTILGILKGYLGLSGAIMTQLYLAFYGNDSESLILLIAWLPAAISIAFASVIRIMKIGTRQPNEQKTMNNFLFAPIVLALFIMAMIIAQRQIPFSKAAYAGSATVVCVLLIILPLFIAVRKEFSPWNIMEKVLAHAANEVIIEKPQIVEAKEKAKDDPNGSCFSNIFNKPERGEDHTILQALLSIDMLLLLISSFAGYGTNVTVVDNLGQIGESLGYTGNTVRSFVSLVSIWNFFGRVLSGFVSEILLHKYKVPRPMLLVFSHFVTCIGHLLIVFPAPGSVYFASVIIGFSFGVVWPIFYALVSELFGLKHFATLQNCVLMVIPLASYVLNVRVTGFFYDREAKNQLIKSGKEWVKGTELTCIGTECYKLPLIMMACVSFFAGVTSLIFVMRTREFYKSDIYKKFTEKAETELTTSSVVCDEERVSNSGVER* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0655 589 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 14 569 - -
Gso12g0655 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 569 - -
Gso12g0655 589 CDD MFS_Mch1p_like 28 539 - -
Gso12g0655 589 Pfam Nodulin-like 29 275 IPR010658 -
Gso12g0655 589 Gene3D MFS general substrate transporter like domains 339 556 IPR036259 -
Gso12g0655 589 SUPERFAMILY MFS general substrate transporter 30 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0655 Gso-Chr12 6362266 6364035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0655 14 581 Nodulin-like Gene Family AT2G28120 57.043 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0655 - - gmx:100799928 1147.11