Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0637 ATGGGAAATCTTGTACTTAACCACAAAATTATGCTTCATCTTTGGTTTGTTGCTTGGATGTGCTTAGGTGCATGCTCAGCTCAATTGTCTTACGACCAAAATAATTGTACTTCAAATGAAATTGGGCAAGGGACAAGGTACAGTTGCAAGTCAACGAAGGATTCATGCAGAACATTCTTGGTGTATAGAGCAAATAAGCATTTGAACACCATTTCAGAAGTCTCAAAGCTCTTCAACACGAACTCTGATGAGGTGCTTCTGAAAAACAACCTCACACCTCTTTCTTTGTTTGATGAACTCAAACAAGGTAAAGAGGTGCTTATTCCTGTTAATTGCACCTGCTCTGGAGGGTATTTTCAAGCCAGTTTAAGCTATAAAGTCCTTAACAACACGACATATTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAACATCTCACACTGGCTGAGGAAAACATTTCACAAGGTAATAAACCAGAAGCTGGTTCTGAGCTTCGTGTGCCTCTCATGTGTGCTTGTCCTGACAGTTACAATTTCACAAGGAGCATGAAGGTGAAGTACCTTGTCACATACCCCCTAATACTAGGAGATGATCCTGACAAATTGAGTGAAAAATTTGGCATCTCAACTGAAGAATTCTATGCAGTTAATAGCTTGAATCCCTTTTCAACGGTTTATCCTGATACAGTTGTTTTTGTTCCAATAAAGGATGGTCCAATCAGAATACATGATATTCCTGATTCTCCTTCTCCACCTCCTGGTTTTCTTTCCACAAATCCAGTGGTTACGACCGAGGAATCCACACAATCATCGAATTTGTACATTGCAGGATCGGTTATAGGATTCTTTTTGTTGATAACATTGCTTGCTAGTGGATTGTACATGAAGAGAATCAGGAAAAGTGATGATGTCCATTCCATTAGTCAAACAAACTCCCTCACTTTGTGGTCACCAACTAGAAGCTCTCATATATCTACCCAAACCGGTAAAAACTCTACTACTTGGTGCCTTTCCCCAGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACAGCATGGAAGAGCTCCAAAAGGCCACCAACAATTTCAGTGAAGAAAACAAGATCGGTCACAACCGGGGTCGCGAAGGTGACTTTGTCTACAAGGGCTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGGTTGGAAGACACACAACAGGTGATTGATTTACATTCTAAAATCAACCACATTAATATTGTGAACTTGCTTGGTGTTTGTTATGTTGGTAAGAGCAATAAAGATCCATGGTCTTATTTAGTTTTTGAGTTGCCTAAGAATGGATGCCTGAGGGACTGCTTATCTGATCCATGCAATCCAATAAATTGGTACAAAAGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAACATTAGTAGTAGAAATATATTCATAACAGCAAATTGGAGGGGAAAACTGGCAGATGTTGGAAGAGCATTGGCTGCTAGTGTCACACTCACACCTACCAAAAGAAATAGTGTGGAAATTCCCAAAGGATTGGTGGCACCAGAATACCTCTTACATGGCTTGGTTTCTGAAAAAGTGGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTGATCTCAGGAAGAGACAACTTTGATGGAAAACCAATCAAAGATTCCCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAGGAGCTTCATGGATCCTAATTTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTCTTAGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCATCCATGGATGATATCATGAAAGTCCTTGCAAAAATGGTGTAG 1923 0.4015 MGNLVLNHKIMLHLWFVAWMCLGACSAQLSYDQNNCTSNEIGQGTRYSCKSTKDSCRTFLVYRANKHLNTISEVSKLFNTNSDEVLLKNNLTPLSLFDELKQGKEVLIPVNCTCSGGYFQASLSYKVLNNTTYSEIACGVFEGLLKHLTLAEENISQGNKPEAGSELRVPLMCACPDSYNFTRSMKVKYLVTYPLILGDDPDKLSEKFGISTEEFYAVNSLNPFSTVYPDTVVFVPIKDGPIRIHDIPDSPSPPPGFLSTNPVVTTEESTQSSNLYIAGSVIGFFLLITLLASGLYMKRIRKSDDVHSISQTNSLTLWSPTRSSHISTQTGKNSTTWCLSPDLLVGIKYYLLNYSMEELQKATNNFSEENKIGHNRGREGDFVYKGSVNDHEVMIKRMRLEDTQQVIDLHSKINHINIVNLLGVCYVGKSNKDPWSYLVFELPKNGCLRDCLSDPCNPINWYKRTQIAFDIATCLYYLHCCSFPSYAHMNISSRNIFITANWRGKLADVGRALAASVTLTPTKRNSVEIPKGLVAPEYLLHGLVSEKVDIFAFGVVLLELISGRDNFDGKPIKDSLGFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPLHRPSMDDIMKVLAKMV* 641
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0637 640 Gene3D Phosphorylase Kinase; domain 1 347 441 - -
Gso12g0637 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 639 - -
Gso12g0637 640 SUPERFAMILY Protein kinase-like (PK-like) 348 636 IPR011009 -
Gso12g0637 640 ProSiteProfiles LysM domain profile. 191 235 IPR018392 -
Gso12g0637 640 Gene3D Transferase(Phosphotransferase) domain 1 444 640 - -
Gso12g0637 640 Pfam Protein tyrosine and serine/threonine kinase 390 574 IPR001245 GO:0004672|GO:0006468
Gso12g0637 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 11 639 - -
Gso12g0637 640 ProSiteProfiles Protein kinase domain profile. 285 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso12g0637 Gso-Chr12 6035145 6037486 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0637 47 640 Receptor kinase-like Gene Family AT2G23770 28.808 3.96e-68 231
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso12g0637 PK_Tyr_Ser-Thr 1.2e-24 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0637 - - gmx:100818937 1293.49
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0637 12 6035145 6037486 Gso11g1492 11 17373610 17375811 GST