Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0617 ATGCCGAGAAAAGGAATGAGAAGCATTTTCTTCAAACCATCAACTTCCACCTCATCGCTACCACCATCTCCTTCCCCTCAACGCACTTTCTCAGACTCCTTAATGGACGAAAACATAGAAACCGCAGAGAAGCTAATAACCAAATGGGACGATTCCAAAGTCCCGACGACAACCGCGCTTTTCAGCGGCACCCGCCAGGAAGCCAAACAATACCTAAACGCGGTGAAGGGACTACAGTCCGCTATGCAGTACCTCGTCGCACAGGATTCCACCTCCAGCACCCTCGTGCGCGCGCAGCTCCTCATGCAACTCGCCATGAAGACGCTCCAGAAAGAGTTCTACCAGATTCTATCCTCCAACAGGGAACACTTGGACCCCGAAACCGTCACCACGCGCTCCTCCGTCGACCTCCGCAGCGTCTCCGATTACGTCTCCGATTACGACGACGAAATCTCAATCACCGAGGACGAGTTCCGCGTCTCCGAGACCGAGCGAGTTTCCATGCTCGCCATGGAGGATTTGAAAGCCATAGCCGAATCCATGATTTCCTCCGGCTACGGCAAGGAGTGCGTCAAGGTTTACATCATCATGAGAAAATCGATCGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAATTGAGCCTCTCTCAGGTTCAGAAACTGGATTGGGAGGTTCTCGAGTTGAAGATCAAGAGCTGGTTACAGGTAGTTAAAGTCGCCGTCGGAACTCTGTTCCACGGCGAAAGGATCCTCTGCGATCACGTCTTCGCCTCGGATTCGGGGAAGAGAATCGCGGAATCATGTTTCGCGGAAATAACCAAAGACGGCGCCGTATCGCTGTTTGGATTCCCGGAAATGGTGGCGAAATGCAAGAAAACGCCGGAGAAAATGTTCAGGATTTTGGATTTGTATGAAGCGATCTCCGATTACTTGCCTCAGATCGAATCCATATTCTCCTTCGAGTCAACGTCTAACATTCGCTCACAGGCCGTTACGTCGATGGTGAAACTCGGCGACGCCGTTAGAACGATGCTAACGGACTTGGAAACCGCGATTCAGAAGGAGTCCTCGAAGAAACCAGTCCCTGGCGGTGGAGTCCACCCTCTCACGCGCTACGTGATGAACTACCTCACTTTCCTCGCCGATTACAGCGGCGTGCTGGTCGATATAATCGCCGATTTGCCGCAATCTCCGTTGCCGGAGTCTTACTACCGCAGCCCGATGCGCGAGGAAAACCCGCCGGCTTCGGAGCTATCGGAGCGAATCGCGTGGATCATACTCGTGGTGCTCTGCAAGCTCGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCATTCTTACCTGTTCCTCGCGAATAACATGCAATACGTCGTCGTAAAGGTGCGCAAGTCGAACCTAGGGTTTCTTCTCGGCGAGGAGTGGTTGGACAAGCATAAGTTGAAGGTTAGAGAGTACGCGTCCAAGTACGAGCGAGTCGGGTGGAGCGCGGTGTTTTCTGCGTTGCCGGAAAATCCCGCGGCGGAGTTGACGGCGGAGCAGGCCAGGGCGTGCTTCGTGAGGTTCGACGCTGCGTTTCATGAAGCGTGTAGAAAACAGGCCTCGTGGTTCGTATCCGACCCGAAATTTCGTGATGAAATCAAAGGGTCGATAGCTTCGAAGCTGGTGCAAAAGTACAGCGAGTTCTACGAGAAGAATCGGGTCGGGTCGGAATCCGTTAGGGGTTTTTTACCCGACGATATAGGGAAATACCTGTCTAACATTTTGTGTAATGGAGATTCGGGCAGTGTCTCGTCACACTCTTCGTCAACGACGTCGTCTTCCCATCGCTCTAATCGACGGTGA 1845 0.5306 MPRKGMRSIFFKPSTSTSSLPPSPSPQRTFSDSLMDENIETAEKLITKWDDSKVPTTTALFSGTRQEAKQYLNAVKGLQSAMQYLVAQDSTSSTLVRAQLLMQLAMKTLQKEFYQILSSNREHLDPETVTTRSSVDLRSVSDYVSDYDDEISITEDEFRVSETERVSMLAMEDLKAIAESMISSGYGKECVKVYIIMRKSIVDEALYHLGVEKLSLSQVQKLDWEVLELKIKSWLQVVKVAVGTLFHGERILCDHVFASDSGKRIAESCFAEITKDGAVSLFGFPEMVAKCKKTPEKMFRILDLYEAISDYLPQIESIFSFESTSNIRSQAVTSMVKLGDAVRTMLTDLETAIQKESSKKPVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIADLPQSPLPESYYRSPMREENPPASELSERIAWIILVVLCKLDGKAELYKDVAHSYLFLANNMQYVVVKVRKSNLGFLLGEEWLDKHKLKVREYASKYERVGWSAVFSALPENPAAELTAEQARACFVRFDAAFHEACRKQASWFVSDPKFRDEIKGSIASKLVQKYSEFYEKNRVGSESVRGFLPDDIGKYLSNILCNGDSGSVSSHSSSTTSSSHRSNRR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0617 614 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 595 IPR004140 GO:0000145|GO:0006887
Gso12g0617 614 MobiDBLite consensus disorder prediction 10 31 - -
Gso12g0617 614 Gene3D Exocyst complex component Exo70 45 593 - -
Gso12g0617 614 MobiDBLite consensus disorder prediction 594 614 - -
Gso12g0617 614 MobiDBLite consensus disorder prediction 1 31 - -
Gso12g0617 614 SUPERFAMILY Cullin repeat-like 39 587 IPR016159 -
Gso12g0617 614 Pfam Exo70 exocyst complex subunit 232 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso12g0617 614 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0617 Gso-Chr12 5757640 5759815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0617 18 588 EXO70 exocyst subunit family AT5G59730 50.000 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0617 K07195 - gmx:100810579 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0617 12 5757640 5759815 Gso11g1225 11 11080322 11082592 GST