Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g0605 | ATGGGTTGGTTTTGTTGCCCAGGGAAATCAAGCAAAAAATCGGTTACCGAAGACTACAGCGACACCCTCAACCAGAAACCCATCAATTTCACTGCCACAGATAGTGTCAAAGTTGATTTCAGAGTGAATGGGAATAAGGAAGATGGTTCTAAAGGTGATCAACTTGCTCTGGACGTAAAGAGTTTAAATTTGAAAGAGGAGGCTTCTCAGGATAGAAAAGATAATGGTAATCGGGCACAGACATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAGTTTTAGGTTGGATTGTTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAACGGACTTCAAGGGATTCGTGAATTTGTTGTTGAAGTGTTGACGTTGAGTTTGGCAGATCACCCTAACCTTGTGAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAGTACATGCCATTAGGATCTTTGGAGGACCATTTGCTTGATATTCGGCCAGGTAGAAAACCACTTGATTGGAACACAAGAATGAAAATAGCAGCTGGTGCAGCTAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTAATATATCGCGATTTGAAATGTTCTAACATTTTGTTAGGAGAGGGATATCATCCTAAATTGTCCGATTTTGGCTTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGCGCCCCAGATTATGCAATGACAGGCCAGTTGACATTCAAGTCAGATATTTACAGCTTCGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAAGCCATTGACCATACAAAACCTGCCAAAGAACAAAATCTAGTTGCATGGGCAAGACCCTTGTTCAGAGATAGGAGAAAATTTTCGCAAATGGTTGACCCATTACTTGAAGGTCAATATCCCGTGAGAGGCCTATACCAAGCTCTTGCCATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTAATAGTTGACGTGGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCCCAACTTCATCCAGCACAAACTTCTAGAAGGAGTCCACCTTCTCAGATGATGAAAAGGGATGATGATGATCATAGACATATTTTAAGCATCGAGCATGAGACAGACAGATCTTAA | 1248 | 0.4239 | MGWFCCPGKSSKKSVTEDYSDTLNQKPINFTATDSVKVDFRVNGNKEDGSKGDQLALDVKSLNLKEEASQDRKDNGNRAQTFSFNELEAATGSFRLDCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLEDHLLDIRPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFRDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQTSRRSPPSQMMKRDDDDHRHILSIEHETDRS* | 416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g0605 | 415 | MobiDBLite | consensus disorder prediction | 379 | 415 | - | - | |
Gso12g0605 | 415 | MobiDBLite | consensus disorder prediction | 392 | 415 | - | - | |
Gso12g0605 | 415 | SMART | serkin_6 | 94 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g0605 | 415 | PANTHER | OS07G0668900 PROTEIN | 1 | 401 | - | - | |
Gso12g0605 | 415 | ProSiteProfiles | Protein kinase domain profile. | 94 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g0605 | 415 | ProSitePatterns | Protein kinases ATP-binding region signature. | 100 | 123 | IPR017441 | GO:0005524 | |
Gso12g0605 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 80 | 392 | IPR011009 | - | |
Gso12g0605 | 415 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED | 1 | 401 | - | - | |
Gso12g0605 | 415 | CDD | STKc_IRAK | 100 | 369 | - | - | |
Gso12g0605 | 415 | Pfam | Protein kinase domain | 99 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g0605 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 388 | - | - | |
Gso12g0605 | 415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 217 | 229 | IPR008271 | GO:0004672|GO:0006468 | |
Gso12g0605 | 415 | PIRSF | ILK | 85 | 380 | - | - | |
Gso12g0605 | 415 | PIRSF | ILK | 29 | 91 | - | - | |
Gso12g0605 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 63 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g0605 | Gso-Chr12 | 5568127 | 5572595 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g0605 | 60 | 373 | Glycoside Hydrolase | AT3G07070 | 62.975 | 5.26e-147 | 422 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Gso12g0605 | Pkinase | 1.1e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g0605 | - | - | gmx:100804000 | 845.499 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g0605 | 12 | 5568127 | 5572595 | Gso11g1238 | 11 | 11271725 | 11276405 | GST | |
Gso15g0382 | 15 | 3449465 | 3453165 | Gso12g0605 | 12 | 5568127 | 5572595 | PCT | |
Gso11g3420 | 11 | 50145133 | 50148902 | Gso12g0605 | 12 | 5568127 | 5572595 | PCT | |
Gso12g0605 | 12 | 5568127 | 5572595 | Gso15g0382 | 15 | 3449465 | 3453165 | PCT | |
Gso12g0605 | 12 | 5568127 | 5572595 | Gso11g3420 | 11 | 50145133 | 50148902 | PCT |