Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0600 ATGGGAAAGTCTTACCCAACCGTGAGCGCTGATTACCAGAAGGCCGTTGAGAAGGCGAAGAAGAAGCTCATAGGCTTCATCGCTGAGAAGAGATGCGCTCCTCTAATGCTCCGTTTGGCATGGCACTCTGCTGGAACTTACGACGTGAGCTCGAAGACCGGTGGTCCCTTCGGAACCATAAAGCACCCCTCCGAACTCGCTCACGGCGCTAACAACGGTCTTGACATCGCTGTTAGGCTTTTGGAGCCACTCAAAGCGGAGTTTCCTATTTTGAGCTACGCCGATTTCTACCAGTTGGCTGGCGTTGTTGCCGTTGAGGTCACCGGTGGACCTGAAGTTCCCTTCCATCCTGGAAGAGAGGACAAACCTGAGCCACCACCAGAGGGTCGCTTGCCCGATGCCACTAAGGGTTCTGACCATTTGAGAGATGTGTTTGGCAAAGCTATGGGGCTTAGTGACCGAGATATCGTTGCTCTGTCTGGGGGTCACACTATTGGAGCTGCGCACAAGGAGCGTTCTGGATTCGAGGGTCCCTGGACCTCTAATCCTCTTATTTTCGACAACTCATACTTCAAGGAGTTGTTGAGTGGTGAGAAAGAAGGCCTCCTTCAGCTACCTTCTGACAAGGCACTTTTGTCTGACCCTGTGTTCCGCCCTCTTGTTGAGAAATATGCATCGGACGAAGATGCCTTCTTCGCTGATTACGCTGAGGCTCACCAAAAGCTTTCTGAGCTTGGGTTTGCTGAAGCCTAA 753 0.5219 MGKSYPTVSADYQKAVEKAKKKLIGFIAEKRCAPLMLRLAWHSAGTYDVSSKTGGPFGTIKHPSELAHGANNGLDIAVRLLEPLKAEFPILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDRDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPVFRPLVEKYASDEDAFFADYAEAHQKLSELGFAEA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Plant ascorbate peroxidase signature 197 222 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Gso12g0600 250 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 1 250 IPR044831 GO:0004601|GO:0034599
Gso12g0600 250 MobiDBLite consensus disorder prediction 113 137 - -
Gso12g0600 250 CDD ascorbate_peroxidase 5 250 - -
Gso12g0600 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Gso12g0600 250 ProSiteProfiles Plant heme peroxidase family profile. 74 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 MobiDBLite consensus disorder prediction 115 137 - -
Gso12g0600 250 Pfam Peroxidase 17 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso12g0600 250 Gene3D Peroxidase, domain 2 132 239 - -
Gso12g0600 250 PANTHER L-ASCORBATE PEROXIDASE 1, CYTOSOLIC 1 250 - -
Gso12g0600 250 Gene3D - 20 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0600 Gso-Chr12 5431993 5434735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0600 72 246 Peroxidase AT4G17690 33.333 9.43e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0600 K00434 - gmx:606508 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0600 12 5431993 5434735 Gso11g1243 11 11420939 11423488 GST