Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0552 ATGATTTCTGAGTCCCTCTTGTTAGTATTCCTCATTGTCTTCATTTCTGCTTCCCTTCTCAAACTCTTGTTTGTGAGAGAAAACAAACCAAAGGCCCACTTGAAGAACCCACCAAGCCCACCTGCAATACCCATAATAGGTCATCTCCACCTCCTTAAACCCCTCATCCATCACTCATTCCGAGACCTCTCTCTCCGATATGGGCCCCTCCTAAGCCTTCGAATTGGTTCCGTTAAGTTCATAGTTGCAAGCACCCCATCACTCGCCCAAGAGTTTCTCAAGACCAACGAGCTCACATACTCTTCCCGCAAAATGAACATGGCCATCAACATGGTCACTTACCACAACGCCACGTTTGCGTTTGCACCTTACGACACTTACTGGAAGTTCATGAAAAAACTAAGCACCACTGAGCTCTTGGGAAACAAAACCCTCGGACACTTCCTACCTATTCGGACGAGGGAAGTTCATGACATCATTCAATTTTTGTTCCATAAATCAAAGGCCCAAGAGAGCGTGAACCTCACCGAAGCGCTTTTGAGTCTTTCCAACAACGTAATATCGCAGATGATGTTGAGCATTAAGAGCTCCGGTACAGACAGCCAGGCAGAGCAGGCACGGACTTTGGTTCGTGAAGTGACGCAGATTTTCGGGGAGTTTAACGTGTCGGATTTCTTAGGTTTCTGCAAAAACTTGGACTTGCAAGGTTTCAGGAAGAGGGCATTGGACATACATAAGAGGTACGATGCTCTGCTAGAGAAGATCATCTCTGATCGTGAGGAGTTGAGAAGGAAATCAAAGGTAGATGGCTGTGAAGATGGAGATGATGAGAAAGTGAAGGATTTTCTTGACATTTTGTTGGATGTTGCTGAGCAGAAAGAATGCGAGGTCCAGTTAACTCGGAACCATGTCAAATCATTGATCTTGGATTATTTTACGGCAGCTACTGACACAACTGCCATATCAGTGGAATGGACAATAGCAGAACTATTTAACAATCCAAAGGTGTTAAAGAAAGCGCAAGAGGAAGTTGATAGAGTCACCGGAAACACGCAATTAGTGTGTGAAGCAGACATTCCAAACCTTCCTTATATTCATGCCATCATAAAAGAAACAATGAGACTTCACCCGCCAATACCAATGATTATGAGGAAAGGAATCGAAGACTGCGTGGTTAATGGAAACATGATTCCAAAAGGTTCAATAGTTTGTGTAAACATTTGGGCTATGGGAAGGGACCCAAATATCTGGAAGAACCCTTTAGAATTCAGGCCAGAGAGGTTTCTAGAAGGTGAAGGAAGTGCTATAGATACCAAAGGGCATCATTTTGAGTTGTTGCCATTTGGCAGTGGAAGGAGAGGGTGTCCTGGAATGCCTTTGGCCATGCGTGAATTGCCCACCATCATTGGAGCACTCATACAATGCTTTGAGTGGAAGATGTTAGGTTCACAAGGTGAAATCTTAGATCATGGAAGAAGCTTAATCAGTATGGATGAACGGCCAGGATTGACTGCCCCAAGGGCCAATGATCTTATTGGCATTCCTGTTGCACGATTGAATCCCACTCCTTTTCTTCAAATGTAG 1584 0.4438 MISESLLLVFLIVFISASLLKLLFVRENKPKAHLKNPPSPPAIPIIGHLHLLKPLIHHSFRDLSLRYGPLLSLRIGSVKFIVASTPSLAQEFLKTNELTYSSRKMNMAINMVTYHNATFAFAPYDTYWKFMKKLSTTELLGNKTLGHFLPIRTREVHDIIQFLFHKSKAQESVNLTEALLSLSNNVISQMMLSIKSSGTDSQAEQARTLVREVTQIFGEFNVSDFLGFCKNLDLQGFRKRALDIHKRYDALLEKIISDREELRRKSKVDGCEDGDDEKVKDFLDILLDVAEQKECEVQLTRNHVKSLILDYFTAATDTTAISVEWTIAELFNNPKVLKKAQEEVDRVTGNTQLVCEADIPNLPYIHAIIKETMRLHPPIPMIMRKGIEDCVVNGNMIPKGSIVCVNIWAMGRDPNIWKNPLEFRPERFLEGEGSAIDTKGHHFELLPFGSGRRGCPGMPLAMRELPTIIGALIQCFEWKMLGSQGEILDHGRSLISMDERPGLTAPRANDLIGIPVARLNPTPFLQM* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0552 527 Gene3D Cytochrome P450 22 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Gso12g0552 527 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 523 - -
Gso12g0552 527 SUPERFAMILY Cytochrome P450 37 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 Coils Coil 245 265 - -
Gso12g0552 527 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 6 523 - -
Gso12g0552 527 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0552 527 Pfam Cytochrome P450 37 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0552 Gso-Chr12 4944345 4947190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0552 11 518 Cytochrome P450 AT5G06900 40.000 2.22e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0552 K23179 - gmx:100783503 1051.97