Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0528 ATGTTTTCAGAGATGTTCTGCACCAAAAACAATACGCATGTTAATCCTCTCTATCAACTCTCAACCATTTTGTTTCTCCCTACCTATCTACTACTCTATAAAAAGAGTGAGTGCTTCACAAGCCATGGGAATAATAGTAAGAGCATAGTAGTAATTACTAGTAATAATAAAATCAAATACTCCAGTGGCATTGGCATTGATAATAGGATTGTGATGGAGAGTGGGAATAATAATGATGAGGAGTTGGATATGGAGATGGAGATGGGAGGGAGTAATGTAAATGGAAATGGGGGGGTTGCAGGGAGTAGTTCGCGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAATTTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAACCACAAAGCTAGGCAGAGACAGAAGCAGAAGCAAGAAACCTTCGCTTACTTCAATCGCTTTCTTCATACGCCTCAACCATTCTTTTCTCCGCCAATTTGCCCAAATGCCATGTGTGCCCCATATTACATACCTCAGGCACAGGGTGAAATTGGGTTTTATCACCCACATCCAAAGGTGCTTGTACCCGTAGGTTTTAGGAGGAGCCCCTCTGAGAAAGTTGTGCCCACAGGCATGCATCAAATGCAACAGAGAATCTCGGATTGCTGTAACTCTCACTACAGTAACCAAGAAACGTTGGATCTTTTCCCTCTGCACCCAACTGGCATTTTGGAAGGGAAAACGACAACAACAACAGACCAGGTGCCTTCTCTGGCTTCAGTTTCTGCTGATAGTTCCACTGATACACCTTCTGCTGCGGCTTCTCCTGATCATATCAATGAAGATCATGATCATGCTTCCCCACTCAACCAACCCTTCTTTGATTTTTTTACTACTTCTGGACAAGGTTCTTATTAA 984 0.4309 MFSEMFCTKNNTHVNPLYQLSTILFLPTYLLLYKKSECFTSHGNNSKSIVVITSNNKIKYSSGIGIDNRIVMESGNNNDEELDMEMEMGGSNVNGNGGVAGSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHTPQPFFSPPICPNAMCAPYYIPQAQGEIGFYHPHPKVLVPVGFRRSPSEKVVPTGMHQMQQRISDCCNSHYSNQETLDLFPLHPTGILEGKTTTTTDQVPSLASVSADSSTDTPSAAASPDHINEDHDHASPLNQPFFDFFTTSGQGSY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0528 327 SUPERFAMILY Homeodomain-like 101 171 IPR009057 -
Gso12g0528 327 MobiDBLite consensus disorder prediction 267 314 - -
Gso12g0528 327 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 86 324 - -
Gso12g0528 327 SMART HOX_1 101 168 IPR001356 GO:0003677
Gso12g0528 327 CDD homeodomain 105 165 IPR001356 GO:0003677
Gso12g0528 327 MobiDBLite consensus disorder prediction 267 296 - -
Gso12g0528 327 Pfam Homeodomain 103 163 IPR001356 GO:0003677
Gso12g0528 327 ProSiteProfiles 'Homeobox' domain profile. 99 164 IPR001356 GO:0003677
Gso12g0528 327 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 86 324 IPR044555 GO:0003700|GO:0099402
Gso12g0528 327 Gene3D - 103 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0528 Gso-Chr12 4731943 4734453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0528 96 320 Wox Gene Family AT5G59340 43.077 1.77e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso12g0528 Homeodomain 8.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0528 - - gmx:100817714 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0528 12 4731943 4734453 Gso11g1190 11 10726709 10728464 GST