Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0512 ATGGAGTCAAACTTTCCAGGTGCTTATCACCTGTTTGGTGAAGACCAGGGCATACCGTATCTCTCAGACTCGCTTGGTTTTCCAACCATGGATCCTTCTTCACCGGAAGACAACGATTTCTCAGAAACTGTCAAGTTCATAAGCCAAATCCTCATGGAAGAAAACGTTGACCAGAGGCCATTCTATGACTCACTCACCTTGCGAGTTACGGAGAAATCCTTCTACGATGCTCTCACTGGCAACCAACCCCCTTTTGTTCTTTGCTCCGAAGCTGAAACCAACACCATAACCAGCAACAACAGTGGCAGCAATTTTTTAAATGAAAATTCTCGTGAGTTAAACATCCCTTCCCCACTCTCTGTTTCTGTTTCTGCTATTCACTTTAACCCCAATCCTCTTTCTCAACCACTGCCATCAGTTACAGTTAGTGACCGGGTCTCAGTTTTGGATTCTTCTATTGCCAAACTCTTAGCGCAGAATATTTCCATTGAGGTTGATTCTGTTTCCAAGTTTAGGAGAGGCTTGGAGGAAGCTACCAAGTTTCTTCCTCCGGAGCCTAAACTTGTAACTGGTCTGGATTTATATAGAGAGCAAGCAATCAATTCGTCCGGAGACACTTCGTATAGGTTGAATAGTAGGAAGAATCACGGGTGTGAAGTGAGAGACACCAGAGAAGAAGAAGAAGAAGAAGGAGGGAGAAGTAACAAGCAATCAGCACTTTCCCTTGTTGATGAGACTGACCTGTCAGATGCTTTTGATCAGGTGTTGCTTCACGAGGAAAACTTGTGGAATGAACACACTTGTTTGCAGAGTGAAGCAGAGAAGGTTGAGGGACCAAATGGAGGGAAGGGTGGTTCAGACAAAAAAGTGAGGAAGAAGAAGAAAACAGTGGACTTGAGGAATCTTCTGTTGATGTGTTCACAAGCTGTGTATGCCAGTGACATCAGGGCTGCCAATGAATTGCTAAAGCAGATTAGGCAACACTCTTCTCCCATTGGGGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGCCTCGAGGCACGCTTGGTTGGGGATGGTACAAGTACCCAAGGAATGTATACTTTTCTGAGCTCTAAGAACATCACTTTTTCTGAGTTACTCAAGGCATACCAGGTTTTCAGTTCCTCCAGCCCTTTCAAGAAGTTTGCATATTTATTTGAAAATACAATGATTATGAAAGCAGCTGCAAGTGCAGAAACCGTCCATATTATTGATTTTGGCATCCTACACGGTTTCCAGTGGCCAATGCTCATTAGGCTTTTGTCAAATAGGGAGGGTGGACCTCCCAAGCTTAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGTCCCACAGAAAAAATTGAGGAAACGGGTCGCCACCTGGCTAACTATTGTAAGCGTTACAATGTTCCCTTTGAGTATAATGCCATATCATCAAGGAACTGGGAAACCATTCAGCTTGAAGCCCTCAAAATTGCAAGCAATGAGCTAGTTGCTGTCTACTGTCACCAGAGGTTTGAGAATTTACTGGATGAGTGTACTATTGAAGTGAACAGTCCTAGAAATGCAGTCCTGCATTTGATCAGGAAGATAAATCCGGATATTTTTACTCACTCCATCACTAACGGATCATATAATGCCCCTTTCTTTACCACGCGGTTTAGGGAGGCTCTCTTTCATTATTCTGCCATTTCTGATAAGAATGACACTGTCATATCTCGTGAAAACGAAAGGAGGTTGATGGTTGAGAGAGAGCTTTATGGCAGGGAGATTATGAATGTTATAGCATGTGAAGGTTCTGACAGGATTGAGAGGCCTGAGACCTACAAACGGTGGCAGGTTAGGAATATGAAGGCTGGTTTCAAGCAGCTACCACTGAATGAGGAATTAATGGCCAAATTTAGGAGTAAGTTAAAGGAATACCACAGAGATTTTGTCTTAGATGAAAATAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTTTGCTTCCTCTTGTTGGGTGCCGGCATAA 2031 0.4377 MESNFPGAYHLFGEDQGIPYLSDSLGFPTMDPSSPEDNDFSETVKFISQILMEENVDQRPFYDSLTLRVTEKSFYDALTGNQPPFVLCSEAETNTITSNNSGSNFLNENSRELNIPSPLSVSVSAIHFNPNPLSQPLPSVTVSDRVSVLDSSIAKLLAQNISIEVDSVSKFRRGLEEATKFLPPEPKLVTGLDLYREQAINSSGDTSYRLNSRKNHGCEVRDTREEEEEEGGRSNKQSALSLVDETDLSDAFDQVLLHEENLWNEHTCLQSEAEKVEGPNGGKGGSDKKVRKKKKTVDLRNLLLMCSQAVYASDIRAANELLKQIRQHSSPIGDASQRLAHYFANGLEARLVGDGTSTQGMYTFLSSKNITFSELLKAYQVFSSSSPFKKFAYLFENTMIMKAAASAETVHIIDFGILHGFQWPMLIRLLSNREGGPPKLRITGIEFPQPGFRPTEKIEETGRHLANYCKRYNVPFEYNAISSRNWETIQLEALKIASNELVAVYCHQRFENLLDECTIEVNSPRNAVLHLIRKINPDIFTHSITNGSYNAPFFTTRFREALFHYSAISDKNDTVISRENERRLMVERELYGREIMNVIACEGSDRIERPETYKRWQVRNMKAGFKQLPLNEELMAKFRSKLKEYHRDFVLDENNNWMLQGWKGRILFASSCWVPA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0512 676 ProSiteProfiles GRAS family profile. 290 674 IPR005202 -
Gso12g0512 676 MobiDBLite consensus disorder prediction 273 292 - -
Gso12g0512 676 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 26 675 - -
Gso12g0512 676 Pfam GRAS domain family 299 673 IPR005202 -
Gso12g0512 676 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 675 IPR005202 -
Gso12g0512 676 MobiDBLite consensus disorder prediction 212 234 - -
Gso12g0512 676 MobiDBLite consensus disorder prediction 205 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0512 Gso-Chr12 4576284 4579092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0512 43 676 GRAS Transcription Factor Family AT1G07530 45.911 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso12g0512 GRAS 7.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0512 - - gmx:100815586 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0512 12 4576284 4579092 Gso11g1174 11 10546910 10549651 GST
Gso12g0512 12 4576284 4579092 Gso15g0328 15 2958002 2960413 PCT
Gso12g0512 12 4576284 4579092 Gso11g3481 11 50693637 50696229 PCT