Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0511 ATGGAGGCCAACTTTCCCAGAAGAGCTCACCAGTTTGGTGAAGAAGAGGAGAGCATATTGTATGTCTCTGATTCTCTTGGTTTTGCAGCGACGGACCCGTCGTTAAGGGACCCTTCACTGGAAGACAATGACTTCTCAGAAACTGCAAAGTTCATAAACCAAATCCTCATGGAAGACAACGTTGAACAGATGCCATTCTATGATTCAATCAACTTGCAAGTTACAGAGAAATCCTTCTACAACGCTCTCACTGGCAACATACCTCTTTCCCCCAATCAACATCCCCTTGTTCTCAGTCCCCAAGCTGAAACCACTCCCACCACCAGCAACAGCAGCAACAACAGCAACCACAACTTTTTAGATGAAAATTCTCTTACTGTTAATCATGGCCTCTCAAATTTGGATTCTTCCACTGCCAAACTCTTGGCACACAATATTTTCAACGATGCCGATTCCCTTTCCCAGTTTAGGAGAGGCTTGGAGGAAGCTACCAGGTTTCTTCCTCCTGGCCCTAAGCTTGTAGCTGGTCTAGATTCAAAGGGAGAGCAACCAATCAATACATTGGGAGAGAATTCCTATGGGTCGAAGGGTAGGAAGAATCACGAGCGCGAAGATACAGACACCAGAGAAGAAGAAGAAAGGAGAAGTAACAAGCAATCAGCACTTAGCCTTGTTGATGAGAGTGACTTGTCAGATGCTTTTGATCGAGTTGTGCTGCTTAGTGTGGAAAATGTTTGTAATGAACACTGTAGTTTGCAGAGTGAAACAGTGAAAGCTGTAGAGCCAGGTGGAGTGAAGGGTCGTCCTAAGAATCAAGCGACAAACAAGGAAACAGTAGATTTGAGGAATCTTCTGATGATGTGTTCACAATCTGTGTATGCCAATGACAAAAGAGCTGCCAATGAATTGCTAGAGCAGATTAGGCAGCACTCTTCTCCCTCTGGGGATGCATTACAGAGGTTGGCTCATTACTTCGCCAATGGCCTCGAAGCACGCTTGGTTGGGGAGGGAATGTTTTCTTTTCTGAAGTCTAAGAGGAGCACTGCTGCTGAGTTTCTGAAGGCACACCAAGATTTTCTATCAGTCAGCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATAAAATGATTATGAAAGCAGCTGTCAAGGCAGAAACCGTCCATATTATTGATTTTGGTATCCAATATGGTTTTCAATGGCCAATGCTTATTAAGTTTTTATCAAATAGAGAGGGTGGACCTCCCAAGCTGAGGATCACAGGGATAGATTTTCCCCAACCTGGTTTTCGCCCCACAGAAAAAATTGAGGAGACAGGTTGCCGTCTTGCTAACTATTCTAAGCGTTACAGCATTCCCTTTGAGTACAATGCCATAGCATCAAGGAACTGGGAAACCATTCAGGTTGAAGCCCTTAATATTGAGACCAACGAGCTAGTTGCTGTGAACTCTCTGATGAAGTTTGAGAATTTAATGGATGAGACTATTGAAGTGGACAGTCCTAGAAATGCTGTCCTACACTTGATCAGGAAGATAAATCCACATATTTTTACTCAGTGCATTGTTAATGGAACATATAATGCCCCTTTCTTTACCACGCGGTTTAGGGAGGCACTCTTCCATTTCTCTACTATTTATGATCTGTGTGACACTGTCATACCTCGTGAAAACGAATGGAGGATGTTGATTGAGAGAGAGGTTATAGGCCGGGAGGCTATGAATGTTATAGCATGCGAAGGTTCTGAGAGGGTTGAGAGGCCCGAGACATACAAACAGTGGCAGGCTAGGAATATGAAGGCTGGTTTCAAGCAGCTACCACTGAATGAGGAATTATTGGCCAAATTTAGGAATGAGTTAAGGAAATCGTACCACAGAGATTTTGTCTTAGATGAAGATAAGAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATATCAAGATGCTAATGAACTCGCTTCAGAGCTCATAGTAGACTAA 2004 0.4356 MEANFPRRAHQFGEEEESILYVSDSLGFAATDPSLRDPSLEDNDFSETAKFINQILMEDNVEQMPFYDSINLQVTEKSFYNALTGNIPLSPNQHPLVLSPQAETTPTTSNSSNNSNHNFLDENSLTVNHGLSNLDSSTAKLLAHNIFNDADSLSQFRRGLEEATRFLPPGPKLVAGLDSKGEQPINTLGENSYGSKGRKNHEREDTDTREEEERRSNKQSALSLVDESDLSDAFDRVVLLSVENVCNEHCSLQSETVKAVEPGGVKGRPKNQATNKETVDLRNLLMMCSQSVYANDKRAANELLEQIRQHSSPSGDALQRLAHYFANGLEARLVGEGMFSFLKSKRSTAAEFLKAHQDFLSVSPFKKFTYFFANKMIMKAAVKAETVHIIDFGIQYGFQWPMLIKFLSNREGGPPKLRITGIDFPQPGFRPTEKIEETGCRLANYSKRYSIPFEYNAIASRNWETIQVEALNIETNELVAVNSLMKFENLMDETIEVDSPRNAVLHLIRKINPHIFTQCIVNGTYNAPFFTTRFREALFHFSTIYDLCDTVIPRENEWRMLIEREVIGREAMNVIACEGSERVERPETYKQWQARNMKAGFKQLPLNEELLAKFRNELRKSYHRDFVLDEDKNWMLQGWKGRILYASTCWVPAYQDANELASELIVD* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0511 667 ProSiteProfiles GRAS family profile. 272 651 IPR005202 -
Gso12g0511 667 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 652 IPR005202 -
Gso12g0511 667 Pfam GRAS domain family 281 650 IPR005202 -
Gso12g0511 667 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 29 652 - -
Gso12g0511 667 MobiDBLite consensus disorder prediction 98 121 - -
Gso12g0511 667 MobiDBLite consensus disorder prediction 167 225 - -
Gso12g0511 667 MobiDBLite consensus disorder prediction 195 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0511 Gso-Chr12 4569708 4572510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0511 42 652 GRAS Transcription Factor Family AT2G29060 47.619 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso12g0511 GRAS 8.2e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0511 - - gmx:100795855 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0511 12 4569708 4572510 Gso11g1173 11 10537931 10546496 GST