Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0510 ATGCTCTCCACGGATTCCCTTTTGGAAAATTTCCCTGGTTCTGTAAACGGATTCATATTTGAAAACGGTCCTGTCTCGGTGTTTTCGAATCAGAATCCGGCAAGTGGGTTTGAGGTGGATGATTCAGTTTCCCCTTCAGAATCTGCCACTGATTCTGGTCCTTCTTCTGGGGCAAGCTCGAATAGAGAACATGTAGAGAGTACTAAACACTCCAATCCAATTCTCAGATACATAAGTGATATTCTCATGGATGAAGAGGATGATTTGGAGCGAAAACCCTGCATGCTGCAGGATTGTTTGAGACTCCAAGCTGCTGAAAAATCATTCTATGATGCATTGGTTCGAAGTTACCCTTCATCACCTCGTCAATTTGATGATAACCCTGACCAAGATGATAATTTTGGTGGAACTACTAGTTCTGAGAGTTTTAGCAGTTATACGACTGATAATTCATGCGAGTCTGATTGGTTTAACGGTGCTAGTGACTTTGATTCCTCTTTCATACAAAGATCTCTAATTTATTCTCCGGAACACGCATATGTAGCTCCTGATCCGTTTAGAGAGACACAAGCTGGGGTCCATTTTTCAAATGGAGCCTGGAATTTGATTCACCCACAGAACAAGCCGCGTGTGATTGAGGATGGTGTGATGCAGGGTTCTGTAACAGCCACAGGATTGAGGGAGAAGAGGAGTTATCTCATGAATGATATGTCACATGAAGAAGAGAGAAGCAACAAGCTTTCTTCTGTCTACTCCGATGATTCGGAGCCATCTAGCATGTTTGATGAGGTGCTGCTTTGTAAGGATGGTAAGAGTCCATCCATTTTTTATGCTGGCCGTGAACCATCACCATCGCAGATTGCTGACTCAGGAGGATCTAATGGGAAGAAAACACGATCAAAGAGAGGTTCCAATAAAGGGACAAGGGCAAGCGTGACGACGGTGGATTTATGGACTTTGCTAATTCAATGTGCACAGGCTGTGGCTAGCTTTGACCAAAGGACTGCAAATGAAACACTGAAGCAGATTAGGCAGCACTCTTCACCTTTTGGCGATGGACTTCAGCGTTTGGCTCATTACTTCGCCGATGGCCTCGAGAAACGGTTAGCTGCTGGGACACCAAAGTTCATTTCCTTTCAGTCAGCATCTGCCGCAGATATGTTGAAAGCATACCGAGTGTATATCTCGGCATCACCATTTCTAAGGATGTCTAATTTCTTGGCAAACCGCACTATTCTGAAGCTAGCGCAAAATGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTAATCCAACGGCTTTCAGAGAGGCCAGGCGGGCCTCCAAAGCTTCTTATGACAGGAATTGATCTTCCCCAGCCGGGATTTAGGCCGGCGGAAAGGGTTGAGGAGACGGGGCGGTGGCTGGAGAAGTACTGCAAGAGGTTTGGAGTCCCATTTGAGTACAATTGCCTTGCACAGAAATGGGAGACTATAAGACTTGAGGACCTCAAAATTGATAGGAGTGAAGTAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTTTCCGATGAAACCGTGACTGCAAACTGTCCAAGAGATGCTTTGCTGAGGTTGATCAGGAGGATCAATCCAAACATCTTCATGCACGGGGTCGTCAATGGCACTTACAATGCACCATTTTTCGTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCATCATTGTTTGACATGTTTGAAGTTAACGTGCCTCGTGAAGATCCATCTAGGCTTATGATTGAGAAAGGGGTGTTCGGAAGGGATGCAATCAATGTGATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAAACCTACAAGCAGTGGCAAGTTAGGAACCAGAGAGCAGGGTTCAAGCAACTTCCATTGGCCCCAGAGCATGTGAATAGAGTGAAGGAAATGGTGAAGAAGGAACATCATAAAGATTTTGTGGTTGATGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGAATTCTTTTTGCTGTTTCCTCTTGGGTTCCTGCTTGA 2064 0.4535 MLSTDSLLENFPGSVNGFIFENGPVSVFSNQNPASGFEVDDSVSPSESATDSGPSSGASSNREHVESTKHSNPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDALVRSYPSSPRQFDDNPDQDDNFGGTTSSESFSSYTTDNSCESDWFNGASDFDSSFIQRSLIYSPEHAYVAPDPFRETQAGVHFSNGAWNLIHPQNKPRVIEDGVMQGSVTATGLREKRSYLMNDMSHEEERSNKLSSVYSDDSEPSSMFDEVLLCKDGKSPSIFYAGREPSPSQIADSGGSNGKKTRSKRGSNKGTRASVTTVDLWTLLIQCAQAVASFDQRTANETLKQIRQHSSPFGDGLQRLAHYFADGLEKRLAAGTPKFISFQSASAADMLKAYRVYISASPFLRMSNFLANRTILKLAQNESSLHIIDFGISYGFQWPCLIQRLSERPGGPPKLLMTGIDLPQPGFRPAERVEETGRWLEKYCKRFGVPFEYNCLAQKWETIRLEDLKIDRSEVTVVNCLYRLKNLSDETVTANCPRDALLRLIRRINPNIFMHGVVNGTYNAPFFVTRFREALFHFSSLFDMFEVNVPREDPSRLMIEKGVFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQLPLAPEHVNRVKEMVKKEHHKDFVVDEDGKWVLQGWKGRILFAVSSWVPA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0510 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 686 IPR005202 -
Gso12g0510 687 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 28 686 - -
Gso12g0510 687 MobiDBLite consensus disorder prediction 120 146 - -
Gso12g0510 687 MobiDBLite consensus disorder prediction 277 308 - -
Gso12g0510 687 ProSiteProfiles GRAS family profile. 308 685 IPR005202 -
Gso12g0510 687 MobiDBLite consensus disorder prediction 119 146 - -
Gso12g0510 687 MobiDBLite consensus disorder prediction 31 62 - -
Gso12g0510 687 MobiDBLite consensus disorder prediction 31 69 - -
Gso12g0510 687 Pfam GRAS domain family 319 684 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0510 Gso-Chr12 4556999 4559780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0510 11 686 GRAS Transcription Factor Family AT2G29060 44.186 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso12g0510 GRAS 8e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0510 - - gmx:100815586 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0510 12 4556999 4559780 Gso11g1171 11 10512482 10515527 GST