Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0479 ATGGCCTCCGTTGCACTCACCACCACCGCCCTCCCCTCCCTCCGTCTCCGCCGCAACACCACCGCCACACTCAAACCAAACCGCCACGCTTCCATTTCACTCAAACCAAACCTCCACGCTTCAATCTCCTCCTTCCCAAATTTCTCACTCAAAAAACCACACCTAATTTCCACTCGCAAACCCTCCGCTTTAACAGTCAGAGCCTCCGCTGCCTCCATCACCCCGGCGCCGGCTCCGGTACAGCCATGGCAAGGCGCTGCCATAAAACCGCTAATAGCCTCCATCGCGACGGGAGTAATCCTCTGGTTCTCACCGGTTCCCGCCGGCGTGAACCGCAACGCGTGGCAACTACTCGCGATTTTCCTAGGCACAATCGTCGGCATTATAACGCAACCCTTGCCTCTTGGCGCGGTAGCAATATTAGGGTTAGGTGTTTCCGTTCTCACCAAAACCCTACCCTTCGCCGCCGCATTCTCCGGCTTCGGCGATCCCATCCCCTGGCTCATCGCCCTCGCCTTCTTCTTCGCCAAGGGTTTCATCAAAACCGGCCTCGGAAACCGCGTCGCGTACCAATTCGTTAAGCTCTTCGGTAGCTCCTCGCTAGGGTTAGGTTACAGCTTGGTCTTCAGCGAGGCGCTTCTTGCGCCGGCGATTCCCTCGGTGTCGGCGAGGGCGGGGGGGATTTTCCTACCGCTGGTGAAGGCGCTGTGCGTGGCTTGCGGGAGCAACGCCGGCGACGGGACAGAGCACAGGTTGGGGGCGTGGCTCATGCTCACGTGCTTTCAGACCTCCGTGATTACGTCGGCGATGTTCTTGACGGCGATGGCAGCGAATCCGCTGTGCGCGACTCTGACGCAGAATTCCATTAACCAGACGATTGGGTGGTTGGATTGGGCTAAAGCCGCAATTGTGCCTGGCTTGGCGTCGTTGGTGTTGGTGCCGTTGATTTTGTATGTTATATATCCGCCGACACTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAAGGAGAAGTTGGAGAAGATGGGGCCCATGACGACCAATGAGAAGATCATGACTGCCACTCTGTTTCTCACGGTGGGACTTTGGGTATTTGGAGGACTTCTTAACATTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACTGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAAGGAGTTGCTTGGGATACCCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGCTACCTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTTGTCAAGTTTGTCGGTGGATTGGGTCTATCATGGCAATTATCTTTTGGAATTCTAGTCCTTCTATACTTTTACTCTCATTACTTCTTTGCGAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTGGCCACTGCTCTGGGGACTCCGCCATTCTTTGGAGCCATAGTGCTGTCCTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTATGGAATTGGATCAGCTCCTGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTATGGATTCCTCATTAGTATTGTTAACATTATAATCTGGCTAGGGCTAGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1662 0.5289 MASVALTTTALPSLRLRRNTTATLKPNRHASISLKPNLHASISSFPNFSLKKPHLISTRKPSALTVRASAASITPAPAPVQPWQGAAIKPLIASIATGVILWFSPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTEHRLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKSSPDAPKLAKEKLEKMGPMTTNEKIMTATLFLTVGLWVFGGLLNIDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0479 553 CDD ArsB_NhaD_permease 125 547 - -
Gso12g0479 553 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 5 553 - -
Gso12g0479 553 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 105 547 IPR001898 GO:0016020|GO:0022857|GO:0055085
Gso12g0479 553 Pfam Sodium:sulfate symporter transmembrane region 90 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Gso12g0479 553 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 5 553 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0479 Gso-Chr12 4274909 4278680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0479 1 552 Antiporters AT5G12860 78.750 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0479 - - gmx:100793559 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0479 12 4274909 4278680 Gso11g1137 11 10244249 10248084 GST