Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0475 ATGGAGATCATTATGCCAAGTTTGGAGAGAGACTTAAATGACACGAGGGGGTATTATGAGAGTGGAAAGACTAAGGAAGCGTCCTGGAGAGAATCGCAGCTCAAAGGGTTGCGTCGTTTTCTCATTGAAAAACAAGAAGATATCATGAATGCCCTCATGCATGATTTAGGGAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGAACGTTGATTAAGACCTTAAATCTGGCGTTGAAGTCTTTGAAACATTGGATGTCAGGCAAAAAGGCTGCGTTGCCGCAATTAGCATTGCTAACCAGTGCAGAAATTGTTCCGGAGCCACTTGGTGTGGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGAATATCCTTGGAGCCACTGATAGGAGCAGTAGCTGCGGGAAATGCAGCAGTCTTAAAGCCTTCAGAGTTGTCTCCAGCATGTTCTTCTCTACTTGCTTCTAATCTCTCCACTTATTTGGACAATAAAGCCATTAAGGTCATCCAAGGAGGGCCAAAAGAAACTCAGCAACTTCTAGAGCAAAGATGGGACAAAATATTCTTCACAGGAAGTGCACATGTGGGGAAGATTGTGATGTCTGCTGCTGTGAAGCATCTAACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGACTCCCTTTCATCTTCTTGGAACATAGAGGTCGCTGTGAAGAGAATTATTGTGGGGAAATATGGGGCATGTGCTGGTCAAGCATGCATAGCAATTGATTATGTCCTTGTGGAAAAGGTTTACTGTTTTAAACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCTCAACAATCCAAAACTATTGCCAAGATAGTTAATAAACACCACTTCTCTAGATTGAAGAATCTTCTTGCTGATAAAAAGGTCAAAGAATCTGTGATTTATGGTGGTTCAATGGACGAACAAAACTTATTTATTGAGCCAACGATCTTGGTGGATCCCCCACTGGAAGCAGCAATTATGTCGGAAGAGATTTTTGGCCCATTACTTCCAATTATTACCGTGGAGAAGATTGAGGACAGTATTAAATTCATAAATTCTAGACCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACCAAACACTGCAGAGAAGAATGATATCTGAAACATCATCTGGCAGTGTGACTATCAACGACGCAATTCTACAATATGCAGTTGATACTGTTCCATTTGGAGGAGTGGGGGAAAGTGGGTTTGGCATGTACCATGGGAAATTCTCCTTTGACACATTTAGCCACCAGAAAGCAATTGTAAGAAGAAGTTTCCTCACTGATTTTTGGTATAGATATCCTCCATGGACACTAAACAAGTTACAACTACTTGAAGTCTCTTACAATTATGATTATCTGGGATTGCTCCTTGTCCTGTTGGGCTTAAAGAGACCGTCAAAACGTTTAATCTCAGATCATGTTTAG 1485 0.4128 MEIIMPSLERDLNDTRGYYESGKTKEASWRESQLKGLRRFLIEKQEDIMNALMHDLGKHQLEAFRDEIGTLIKTLNLALKSLKHWMSGKKAALPQLALLTSAEIVPEPLGVVLIISSWNFPFGISLEPLIGAVAAGNAAVLKPSELSPACSSLLASNLSTYLDNKAIKVIQGGPKETQQLLEQRWDKIFFTGSAHVGKIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWNIEVAVKRIIVGKYGACAGQACIAIDYVLVEKVYCFKLVELMKVWIKKMFGENPQQSKTIAKIVNKHHFSRLKNLLADKKVKESVIYGGSMDEQNLFIEPTILVDPPLEAAIMSEEIFGPLLPIITVEKIEDSIKFINSRPKPLALYVFTKNQTLQRRMISETSSGSVTINDAILQYAVDTVPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVLLGLKRPSKRLISDHV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0475 494 Pfam Aldehyde dehydrogenase family 26 440 IPR015590 GO:0016491
Gso12g0475 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 IPR012394 GO:0006081
Gso12g0475 494 PIRSF ALDH 3 476 IPR012394 GO:0006081
Gso12g0475 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 438 IPR016162 GO:0016491
Gso12g0475 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Gso12g0475 494 SUPERFAMILY ALDH-like 16 457 IPR016161 GO:0016491
Gso12g0475 494 PANTHER ALDEHYDE DEHYDROGENASE 6 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0475 Gso-Chr12 4233951 4237116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0475 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 52.479 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0475 K00128 - gmx:100817701 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0475 12 4233951 4237116 Gso11g1132 11 10203251 10206984 GST
Gso15g0305 15 2765996 2770366 Gso12g0475 12 4233951 4237116 PCT
Gso11g3500 11 50865925 50869562 Gso12g0475 12 4233951 4237116 PCT
Gso12g0475 12 4233951 4237116 Gso15g0305 15 2765996 2770366 PCT
Gso12g0475 12 4233951 4237116 Gso11g3500 11 50865925 50869562 PCT