Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0468 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGGTTTTTTGGAAGTGCAGCTACCATGAACATGTGTTCTAAATGCCACAAAGACATATTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGGTCATCAAGCAGCACTGAAAAGGAACCTGTTGTTGCTGCTGCTGCTAATATTGATATCCCAGTTATTCCAGTAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGGTCCAGAGGGGAGTGTTGAGGCAAAGCCGAAGGATGGACCAAAACGTTGCAGCAGCTGCAACAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGTGACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCCGCTCAAGATGCTATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAAAAGCTTGATAAGATCTAA 525 0.4514 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDILLKQEQAKLAASSIGNIMNGSSSSTEKEPVVAAAANIDIPVIPVEPKTVSVQPLFGSGPEGSVEAKPKDGPKRCSSCNKRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAAQDAIAKANPVVKAEKLDKI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0468 174 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 174 - -
Gso12g0468 174 SUPERFAMILY AN1-like Zinc finger 105 169 IPR035896 -
Gso12g0468 174 ProSiteProfiles Zinc finger AN1-type profile. 109 155 IPR000058 GO:0008270
Gso12g0468 174 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Gso12g0468 174 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Gso12g0468 174 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Gso12g0468 174 Pfam AN1-like Zinc finger 115 151 IPR000058 GO:0008270
Gso12g0468 174 Gene3D - 4 69 - -
Gso12g0468 174 SMART AN1_Zf_4 115 152 IPR000058 GO:0008270
Gso12g0468 174 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Gso12g0468 174 Gene3D - 98 170 IPR035896 -
Gso12g0468 174 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0468 Gso-Chr12 4165798 4168499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0468 8 174 C2H2 Transcription Factor Family AT3G52800 42.515 3.64e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0468 - - gmx:100499857 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0468 12 4165798 4168499 Gso11g1123 11 10133232 10135986 GST