Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0456 ATGCTGATATCTCCTGCATACCTATCTATTACTAGTTATCTAAATTTCATCCTAAGTGCCAGTAAATGGATAGATGGATTTCCCTGGTTAAATTACTTAATTTCCCTGACTTTTGCACCTCTTGCTTGGATTCTTTGTATTGCTTCTACTTGCATTTGCATTTCATTATTTGGAAGCTCTTTCTTGGGGCCAAACTATGCCCTTACCTCTGAAATCTCCATCTACTCAATGGATTTTGTTAAGTGGTGGGCACTATATAAGGCCCAAGAAATTTCTTCTAAAATTCTGGCTATACACCTCAGAGGAACAGTGCTTCTAAATTACTGGTTTGAGATGCTGGGTGCAAGGATTGGATCCTCAGTTTTACTTGATACAGTTGACATCACTGACCCATCTATGGTGTCAATTGGAGATGAAGTTGTCATTTCTGAAGGTGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTAAGTTTCCATCCTATTAGGATTGGCAAATGTTCTTCCATTGGACCTTATGCTGTTATCCAAAAAGGAAGTGTTATTGGAGAAGGTGTTGAGGTACAGGCCCTGCGGAAGGTTGGACAAGACCAACATGTGTTCAAACCTGCAAAGCTTAATAATGATAACAAGAAATGTTATGTACAAAATGCAGAACTACTCATTACCAGCAAAACTCAATATGATATTATCTACCACTTTATGGGAATCTATCTTGTTGGCTTTCTCAGCTCCCTTGCTGCAGTCATTGCCTACTTCTTATATATTTGGTTCTCCAAGCAACCTCCATCACCCCAACACTTTACCTTTGTTTGCATATGTGGGGCCTTCCATTGGATACCCTTTACAATCTTTACATATGCTACCATGTTTTCTGAAGTCTCATCAAACCCCATCATCTTTGCCATTTCATTTACCAGCGCCTACTTGCTTCATGGTTTCATACTCATCATTCTCACCACTGCTTTTACTCGTCTCCTCAAAACTTGTCAAAAGAAAACCCAATTTAAAACCCAGCTTCAATGCCAAATGATAACTTCCTGCCACCTTAGATGTGCAAAACTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCGAGTTTCAAATCCAGAGTTAATGTCTATTGGTGATGGTGTCCATCTTGGAGATTTTAGCTGTGTAATTACAGGCTTTCATTCTTCAAGTGGATATGTTAGTGGAAAAGTTGAGGTTCAGGACAATTCGGTTATTGGTAGTCAAAGTCTAATCCTCCCTGGTTCTCTAGTCCAAAAGAATGTGATTCTTGGTGCACTTTCAGTTGCTCCAATGAATTCTACACTTCAAGAGGGTGGTGTCTACATTGGATCACAATCCCAAGTTGTCATAAGGAACTCAGTGAAGAATGCTTATGATGAAGGGATAGAAGAGATGGACATGGTAAGTAAGAAAAGAGTTGGTAATTTGGCTGCAGCACTGCACAAAAATGACTCACAGAAAGTGACCTTGACCAGAACATGGTATCAGACCTTCTCCGCACTCTTCACTCAGCCACTGCTACAAACAGTGTTACCTCATATGGTGTTAGGTTTAGCAGTTTTTGCTCCCTTGAACTGTGTTTTTTACCTAAAGAGTGCCAAGAATCTTCCAATATACTGGTTGCTTCCCTTGTTTTGGATTCACTCGGGAGCCTTAGCCGCATTGGCGTGTGTGATAGCAAAATGGATTCTTGCAGGAAAGAAAAAGGCAGGTGAAGCAGTGCCTATATGGAGTCAAAGGATCACATTGGACAACACATGGCAGGCCATTAGAACCTTAGTTGGAGACTATTTTATGGACATGACAAGTGGATCATTTTGGTTTGTGCTGTGGATGAAGTTGATGGGTGCAAAAGTGGATATGGAACATGCAGTTTATGTAGATAGCATGGGGGCCTTATTGAACCCTGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGGAGAGAAGCCTTGCTCTTTGGACATGTATATGAAGGGGAAGGAGGAATGGTGAAGTTTGGAGAGATCAAAATTGGAGAATATGGGTTTGCAGGGAGTAGAGCTGTGGCGATGCCAGGTGTGCAAATAGAGAGTGAGGGCAATCTTAGTGCTTTGTCACTTGCCATGAAGGAAGAAATCATTAGATCAAGGTGA 2208 0.4117 MLISPAYLSITSYLNFILSASKWIDGFPWLNYLISLTFAPLAWILCIASTCICISLFGSSFLGPNYALTSEISIYSMDFVKWWALYKAQEISSKILAIHLRGTVLLNYWFEMLGARIGSSVLLDTVDITDPSMVSIGDEVVISEGVLVQSHEVKNGILSFHPIRIGKCSSIGPYAVIQKGSVIGEGVEVQALRKVGQDQHVFKPAKLNNDNKKCYVQNAELLITSKTQYDIIYHFMGIYLVGFLSSLAAVIAYFLYIWFSKQPPSPQHFTFVCICGAFHWIPFTIFTYATMFSEVSSNPIIFAISFTSAYLLHGFILIILTTAFTRLLKTCQKKTQFKTQLQCQMITSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINRVSNPELMSIGDGVHLGDFSCVITGFHSSSGYVSGKVEVQDNSVIGSQSLILPGSLVQKNVILGALSVAPMNSTLQEGGVYIGSQSQVVIRNSVKNAYDEGIEEMDMVSKKRVGNLAAALHKNDSQKVTLTRTWYQTFSALFTQPLLQTVLPHMVLGLAVFAPLNCVFYLKSAKNLPIYWLLPLFWIHSGALAALACVIAKWILAGKKKAGEAVPIWSQRITLDNTWQAIRTLVGDYFMDMTSGSFWFVLWMKLMGAKVDMEHAVYVDSMGALLNPEMVKIERGGCVGREALLFGHVYEGEGGMVKFGEIKIGEYGFAGSRAVAMPGVQIESEGNLSALSLAMKEEIIRSR* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0456 735 SUPERFAMILY Trimeric LpxA-like enzymes 369 472 IPR011004 -
Gso12g0456 735 SUPERFAMILY Trimeric LpxA-like enzymes 101 201 IPR011004 -
Gso12g0456 735 PANTHER AMP-BINDING ENZYME 500 735 - -
Gso12g0456 735 PANTHER AMP-BINDING ENZYME 1 504 - -
Gso12g0456 735 Gene3D Hexapeptide repeat proteins 349 497 - -
Gso12g0456 735 Gene3D Hexapeptide repeat proteins 98 217 - -
Gso12g0456 735 SUPERFAMILY Trimeric LpxA-like enzymes 620 728 IPR011004 -
Gso12g0456 735 PANTHER AMINE OXIDASE 1 504 - -
Gso12g0456 735 PANTHER AMINE OXIDASE 500 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0456 Gso-Chr12 4017164 4020026 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0456 - - gmx:112997640 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0456 12 4017164 4020026 Gso11g1111 11 9967696 9974607 GST
Gso15g0282 15 2572426 2580300 Gso12g0456 12 4017164 4020026 PCT
Gso11g3525 11 51076789 51078513 Gso12g0456 12 4017164 4020026 PCT
Gso12g0456 12 4017164 4020026 Gso15g0282 15 2572426 2580300 PCT
Gso12g0456 12 4017164 4020026 Gso11g3525 11 51076789 51078513 PCT