Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0455 ATGGATGCAAGTGACCTTGAAAAGGATTTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTAAAGATTAAAGGGCTAGAACATTTGCCTGTTGGATTCTATTATTTTAGTGAATATATGGAAGATCCTAGCACAATGGGACATCCAGTTGCAATGCAGAGATTTTATTCTGACACTAATATATTCTTATTATGGTCCTACGGCAACTCTGTTGATATTAAGGAACCGACAGTCATGGAGCTTGTAATCAAGACAATAGAAGCCATTGGGGGAGAGGTTGAGCATGTCATTCTTCAGCGTCGCTTTATGTATTTTCCTCATGTTGGCAGCCAAGATATGAAAGATGGTTTTTATGAAAAGTTGGAATCTGAGCTTCAAGGTTCAAGGAATACTTATTATGTAGGCGGACTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCATATAGGAATGATTTTCCAATATTTCCTTACACCAAGAATTTGTTTCCCTTGCAAGCTTTGTGCCAGAAAAAGAATCGTAGAGAATTAGGTGAATTGCCAGAAGTGCAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAACGCACTGGGGAACTCATCCAATCACTCAAAACAGGGCTCTTTATACTTGGATTAATGAAGAAGGGACTCCAGTATGCCAAAGGACCTATGGAGAACTATATTTTAATTCTTCTTGCATTGCACATAAGCTCCTAACAAGCCAAAAGCCAGTTATCAAGCCCGGTGACAAGGTTCTCCTGATCTATGTCCCTGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCCATTCTTCCTCCAGATCCCATGCAAAGAAATGGACAAGCACTAATTCGAATTGAAAACGTTGCCAAGTCATGTAACATTGTGGCAATTTTATCAACTGTAGCTTATCACTCAGCAGTCCGTGCAGGTTCGTTGAAAAATTTAATCTCATTAACTGAAAAAAATGGGAAATCCTCAGCTCGGTGGCCGAATCTTCCATGGTTGCACACTGGTACATGGGTCAAGAACTCCAAAAGTATGATTCTGGAACATCTTGACAAACAATGTGAACCTCAGCCAGGTGATATATGTTTCTTGCAATTTACCTCAGGTTCAACTAGTGATGCCAAAGGAGTCATGATTACTCATGGTGGGCTAATTCACAATGTAAAGTTCATGCGAACAAGATACAAGAGCACCTCAAGGACAACGCTAGTAAGCTGGCTCCCTCAGAATCATGACATGGGGCTGATTGGGGGACTTTTTACATCTCTTGTTAGTGGTGGATCTGCAGTTTTATTTTCACCGATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATTAGCAAGTATCAAGCAACTCATAGCGCTGGACCCAACTTTGCCTTTGAGTTACTGATTCAAAGATTGGAGTCTGACAAGGATAAGCTTCAGAATTTAGACCTCTCATCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCATGAAAAGATTTATTGAGCTAACCAGTCCTTTTGGCTTATCTGAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGCTGTGCATTTGGAGAAGGTAAGCCAATCATTGTTGATTGGCAGGGAAGAATTTGTTGTGGATATGTTAATCACAAGGATGCGGATGTTGACATTAGAATAGTTGATCCAGAGACTTGTGAAGAGCTTCAAGAAGATGGAAAGGAGGGAGAGATCTGGATTAGTAGTCCAAGTGCAGGCATAGAATACTGGGGAAGGGAAGAATTGAGTCAAAAAACTTTCAGGAATGAACTTCATAATCATCCTGGACGTAGCTACACAAGAACTGGATACTTGGGACGAATAATAGATCAGAAGTTATTCATCACTGGAAGGATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCGGCAGATGTTGAAAAGACAGTTGAGACTTCATCAGAATTTCTTCGTCCTGGTTGCTGTGCTGTCATTGGAGTCCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCACTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGAAAGCCAGTCAGCAAAGATTTGATTGAGAAAATTAAGACTCGTGTGGTAGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTGTCAAACAGTTCACAGATGAAACACTGAACTTGGTACCACAAGGTTCAAAAACTATTTTGACAAAGAAGTCTTTGTTAAGGCCATTCACTACAGGAGCATGGGGAGAAGAAAAAAGACCAGGGCAACAGCAAGTAAGAAGTATACTTGCACCTAGGAAAAGGATCAGTAAGAATGAAATTGTAGAGTTCTTGAAAGGGCTTATTTCTGAGCAGACGGGAATCCCAATCAACGACATCTCAGTCACAGACAACCTGACATCCTATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTGTCAGATTTCTTAGGAACTCCAGTTGCAGCTATAGATGTTTTCACTGCATCCTGA 2691 0.4039 MDASDLEKDLFSKVETNDYYTTVLKIKGLEHLPVGFYYFSEYMEDPSTMGHPVAMQRFYSDTNIFLLWSYGNSVDIKEPTVMELVIKTIEAIGGEVEHVILQRRFMYFPHVGSQDMKDGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFAYRNDFPIFPYTKNLFPLQALCQKKNRRELGELPEVQFPNLPTLNSYLTHWGTHPITQNRALYTWINEEGTPVCQRTYGELYFNSSCIAHKLLTSQKPVIKPGDKVLLIYVPGLDFIDAFFGCLRAKVIPVPILPPDPMQRNGQALIRIENVAKSCNIVAILSTVAYHSAVRAGSLKNLISLTEKNGKSSARWPNLPWLHTGTWVKNSKSMILEHLDKQCEPQPGDICFLQFTSGSTSDAKGVMITHGGLIHNVKFMRTRYKSTSRTTLVSWLPQNHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELLIQRLESDKDKLQNLDLSSLTFLMVAAEPVRQKTMKRFIELTSPFGLSEKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRICCGYVNHKDADVDIRIVDPETCEELQEDGKEGEIWISSPSAGIEYWGREELSQKTFRNELHNHPGRSYTRTGYLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVIGVPEEILSAKGISTPDGSDQVGLVVIAEVRDGKPVSKDLIEKIKTRVVEEHGVNVASVKLIKPRTISKTTSGKIKRFECVKQFTDETLNLVPQGSKTILTKKSLLRPFTTGAWGEEKRPGQQQVRSILAPRKRISKNEIVEFLKGLISEQTGIPINDISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTAS* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0455 896 SUPERFAMILY ACP-like 833 894 IPR036736 -
Gso12g0455 896 Gene3D - 96 162 IPR036188 -
Gso12g0455 896 Gene3D - 664 792 IPR045851 -
Gso12g0455 896 Pfam Phosphopantetheine attachment site 840 894 IPR009081 -
Gso12g0455 896 SUPERFAMILY Acetyl-CoA synthetase-like 204 788 - -
Gso12g0455 896 CDD FAAL 211 783 IPR040097 GO:0008610
Gso12g0455 896 ProSitePatterns Phosphopantetheine attachment site. 864 879 IPR006162 -
Gso12g0455 896 ProSiteProfiles Carrier protein (CP) domain profile. 835 896 IPR009081 -
Gso12g0455 896 Pfam AMP-binding enzyme 235 669 IPR000873 -
Gso12g0455 896 Gene3D - 191 663 IPR042099 -
Gso12g0455 896 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 1 896 - -
Gso12g0455 896 Gene3D - 825 895 IPR036736 -
Gso12g0455 896 ProSitePatterns Putative AMP-binding domain signature. 391 402 IPR020845 -
Gso12g0455 896 PANTHER OS04G0473900 PROTEIN 1 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0455 Gso-Chr12 4011351 4017028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0455 387 702 Monolignol Biosynthesis Gene Families AT1G20480 25.552 2.45e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0455 - - gsj:114378589 1807.73